RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 EIF3CLB5ME19 914 aaKnown RBP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 ICE2Q659A1 982 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 HDXQ7Z353 690 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 EIF3CQ99613 913 aaKnown RBP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 PAG1Q9NWQ8 432 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 AKAP2Q9Y2D5 859 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 MAST3O60307 1309 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 IVLP07476 585 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 ZNF827Q17R98 1081 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 HNRNPLLQ8WVV9 542 aaKnown RBP11.82□□□□□ -0.52
CLIP4-208ENST00000456385 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
CLIP4-208ENST00000456385 M0R2C6 588 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 CPLX1O14810 134 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 TIMM10P62072 90 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 NFE2L3Q9Y4A8 694 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 ANKARQ7Z5J8 1434 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 RGPD8O14715 1765 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-208ENST00000456385 HEG1Q9ULI3 1381 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 MAGEA9P43362 315 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 USP5P45974 858 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 VSNL1P62760 191 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 SKIDA1Q1XH10 827 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLIP4-208ENST00000456385 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-208ENST00000456385 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 SAMSN1Q9NSI8 373 aaKnown RBP11.81□□□□□ -0.52
CLIP4-208ENST00000456385 RAB21Q9UL25 225 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
CLIP4-208ENST00000456385 SLIT1O75093 1534 aa11.81□□□□□ -0.52
CLIP4-208ENST00000456385 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 A0A1B0GUL7 405 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 ABL1P00519 1130 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 CCDC175P0C221 793 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 SLC39A6Q13433 755 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 PTPAQ15257 358 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 TTC31Q49AM3 519 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-208ENST00000456385 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 GOLGA6L1Q8N7Z2 621 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 CPLX3Q8WVH0 158 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 MED15Q96RN5 788 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 JRKLQ9Y4A0 524 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 PRC1O43663 620 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 ZNF18P17022 549 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 RXRAP19793 462 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 CASP8Q14790 479 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 CCDC102BQ68D86 513 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 MSANTD4Q8NCY6 345 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 IP6K1Q92551 441 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 CDC23Q9UJX2 597 aa11.8□□□□□ -0.52
CLIP4-208ENST00000456385 PXDNQ92626 1479 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-208ENST00000456385 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-208ENST00000456385 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
CLIP4-208ENST00000456385 C1orf141Q5JVX7 400 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-208ENST00000456385 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 OSBP2Q969R2 916 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 MAP3K14Q99558 947 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 KCNH3Q9ULD8 1083 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
CLIP4-208ENST00000456385 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 FOXP2O15409 715 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 TEX33O43247 280 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 ANTXR2P58335 489 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 CEP112Q8N8E3 955 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 DRC1Q96MC2 740 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 METTL22Q9BUU2 404 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 KIF5CO60282 957 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 PPP6R2O75170 966 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms