RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
USP39-208ENST00000455732 MCAMP43121 646 aa21.28■■□□□ 1
USP39-208ENST00000455732 TNNI2P48788 182 aa21.28■■□□□ 1
USP39-208ENST00000455732 CACNB3P54284 484 aa21.28■■□□□ 1
USP39-208ENST00000455732 DIXDC1Q155Q3 683 aa21.28■■□□□ 1
USP39-208ENST00000455732 CCDC158Q5M9N0 1113 aa21.28■■□□□ 1
USP39-208ENST00000455732 FKBP1CQ5VVH2 108 aa21.28■■□□□ 1
USP39-208ENST00000455732 SPTY2D1Q68D10 685 aaPredicted RBP21.28■■□□□ 1
USP39-208ENST00000455732 REM2Q8IYK8 340 aaPredicted RBP21.28■■□□□ 1
USP39-208ENST00000455732 RHPN1Q8TCX5 695 aa21.28■■□□□ 1
USP39-208ENST00000455732 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
USP39-208ENST00000455732 ABHD8Q96I13 439 aa21.28■■□□□ 1
USP39-208ENST00000455732 TMEM39BQ9GZU3 492 aa21.28■■□□□ 1
USP39-208ENST00000455732 DAGLAQ9Y4D2 1042 aa21.28■■□□□ 1
USP39-208ENST00000455732 AK9Q5TCS8 1911 aa21.27■■□□□ 1
USP39-208ENST00000455732 UNCXA6NJT0 531 aa21.27■■□□□ 1
USP39-208ENST00000455732 TTC39AQ5SRH9 613 aa21.27■■□□□ 1
USP39-208ENST00000455732 SAGE1Q9NXZ1 904 aa21.27■■□□□ 1
USP39-208ENST00000455732 TLR7Q9NYK1 1049 aaKnown RBP21.27■■□□□ 1
USP39-208ENST00000455732 PI16Q6UXB8 463 aa21.26■□□□□ 0.99
USP39-208ENST00000455732 FAM83AQ86UY5 434 aa21.26■□□□□ 0.99
USP39-208ENST00000455732 RNF186Q9NXI6 227 aa21.26■□□□□ 0.99
USP39-208ENST00000455732 ABCF2Q9UG63 623 aa21.26■□□□□ 0.99
USP39-208ENST00000455732 MYO5AQ9Y4I1 1855 aaKnown RBP21.26■□□□□ 0.99
USP39-208ENST00000455732 GAKO14976 1311 aa21.26■□□□□ 0.99
USP39-208ENST00000455732 AACSQ86V21 672 aa21.25■□□□□ 0.99
USP39-208ENST00000455732 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
USP39-208ENST00000455732 CLMNQ96JQ2 1002 aa21.25■□□□□ 0.99
USP39-208ENST00000455732 CCDC8Q9H0W5 538 aaPredicted RBP21.25■□□□□ 0.99
USP39-208ENST00000455732 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
USP39-208ENST00000455732 IGSF3O75054 1194 aa21.24■□□□□ 0.99
USP39-208ENST00000455732 IREB2P48200 963 aaKnown RBP21.24■□□□□ 0.99
USP39-208ENST00000455732 SPRYD7Q5W111 196 aa21.24■□□□□ 0.99
USP39-208ENST00000455732 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
USP39-208ENST00000455732 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
USP39-208ENST00000455732 CLASRPQ8N2M8 674 aaKnown RBP21.24■□□□□ 0.99
USP39-208ENST00000455732 FAM163AQ96GL9 167 aaPredicted RBP21.24■□□□□ 0.99
USP39-208ENST00000455732 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
USP39-208ENST00000455732 TRPA1O75762 1119 aa21.23■□□□□ 0.99
USP39-208ENST00000455732 TM4SF4P48230 202 aa21.23■□□□□ 0.99
USP39-208ENST00000455732 CDC42EP5Q6NZY7 148 aa21.23■□□□□ 0.99
USP39-208ENST00000455732 SLC10A4Q96EP9 437 aa21.23■□□□□ 0.99
USP39-208ENST00000455732 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
USP39-208ENST00000455732 MECOMQ03112 1051 aa21.22■□□□□ 0.99
USP39-208ENST00000455732 MKRN3Q13064 507 aaKnown RBP21.22■□□□□ 0.99
USP39-208ENST00000455732 ANKRD13AQ8IZ07 590 aa21.22■□□□□ 0.99
USP39-208ENST00000455732 TBC1D9Q6ZT07 1266 aa21.21■□□□□ 0.99
USP39-208ENST00000455732 ZNF384Q8TF68 577 aa21.21■□□□□ 0.99
USP39-208ENST00000455732 NSUN4Q96CB9 384 aaKnown RBP21.21■□□□□ 0.99
USP39-208ENST00000455732 WNK4Q96J92 1243 aa21.21■□□□□ 0.99
USP39-208ENST00000455732 CRBNQ96SW2 442 aa21.21■□□□□ 0.99
USP39-208ENST00000455732 MROH7-TTC4A0A0A0MT08 1334 aa21.21■□□□□ 0.99
USP39-208ENST00000455732 APBB1O00213 710 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 ZBTB48P10074 688 aaPredicted RBP21.2■□□□□ 0.98
USP39-208ENST00000455732 GSTO1P78417 241 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 NFIAQ12857 509 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.2■□□□□ 0.98
USP39-208ENST00000455732 FAM151AQ8WW52 585 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 PCDHB15Q9Y5E8 787 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 RFX7Q2KHR2 1363 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 DOCK2Q92608 1830 aa21.2■□□□□ 0.98
USP39-208ENST00000455732 CYP2E1P05181 493 aaPredicted RBP21.19■□□□□ 0.98
USP39-208ENST00000455732 GJA5P36382 358 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 ZAP70P43403 619 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 SREBF2Q12772 1141 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 AAMPQ13685 434 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.19■□□□□ 0.98
USP39-208ENST00000455732 LRRCC1Q9C099 1032 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 SNRKQ9NRH2 765 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 USP40Q9NVE5 1235 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 FAM198AQ9UFP1 575 aa21.19■□□□□ 0.98
USP39-208ENST00000455732 MAST2Q6P0Q8 1798 aa21.18■□□□□ 0.98
USP39-208ENST00000455732 GPR75-ASB3A0A0A6YYF3 556 aa21.18■□□□□ 0.98
USP39-208ENST00000455732 IFIT2P09913 472 aaKnown RBP21.18■□□□□ 0.98
USP39-208ENST00000455732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
USP39-208ENST00000455732 RAI14Q9P0K7 980 aa21.18■□□□□ 0.98
USP39-208ENST00000455732 LRP2BPQ9P2M1 347 aa21.18■□□□□ 0.98
USP39-208ENST00000455732 MANSC4A6NHS7 340 aaPredicted RBP21.17■□□□□ 0.98
USP39-208ENST00000455732 CCDC85CA6NKD9 419 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 LDHCP07864 332 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 BTDP43251 543 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 MAP3K9P80192 1104 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 TCP10Q12799 353 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 IDI2Q9BXS1 227 aa21.17■□□□□ 0.98
USP39-208ENST00000455732 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.17■□□□□ 0.98
USP39-208ENST00000455732 MAP4K4O95819 1239 aaPredicted RBP21.16■□□□□ 0.98
USP39-208ENST00000455732 INHBEP58166 350 aa21.16■□□□□ 0.98
USP39-208ENST00000455732 VGLL4Q14135 290 aa21.16■□□□□ 0.98
USP39-208ENST00000455732 HOOK2Q96ED9 719 aa21.16■□□□□ 0.98
USP39-208ENST00000455732 ELP3Q9H9T3 547 aa21.16■□□□□ 0.98
USP39-208ENST00000455732 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 RHBDL3P58872 404 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 TMED8Q6PL24 325 aaPredicted RBP21.15■□□□□ 0.98
USP39-208ENST00000455732 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 OPTNQ96CV9 577 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 CFHR5Q9BXR6 569 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 MCOLN1Q9GZU1 580 aa21.15■□□□□ 0.98
USP39-208ENST00000455732 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
USP39-208ENST00000455732 ENTPD3O75355 529 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms