RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 PSMD2Q13200 908 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 IQCB1Q15051 598 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 FAM208AQ9UK61 1670 aaKnown RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 PTPN14Q15678 1187 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 CWF19L2Q2TBE0 894 aaKnown RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 HHATQ5VTY9 493 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 FILIP1Q7Z7B0 1213 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 TRIM7Q9C029 511 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.64
LINC01940-201ENST00000455228 A0A0D9SFI3 127 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 FESP07332 822 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 RMI1Q9H9A7 625 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 AMOTL2Q9Y2J4 779 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 MAP2K7O14733 419 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 KCNQ3O43525 872 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 HOXB7P09629 217 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 FOSBP53539 338 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 PLEKHO1Q53GL0 409 aaPredicted RBP11.02□□□□□ -0.65
LINC01940-201ENST00000455228 BRF1Q92994 677 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 GTF3C6Q969F1 213 aa11.02□□□□□ -0.65
LINC01940-201ENST00000455228 JAK2O60674 1132 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC15Q0P6D6 951 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 MTX1Q13505 466 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 ELF2Q15723 593 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC73Q6ZRK6 1079 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 ZKSCAN4Q969J2 545 aaPredicted RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 EAF2Q96CJ1 260 aaPredicted RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 RBM17Q96I25 401 aaKnown RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 HMG20BQ9P0W2 317 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 EID1Q9Y6B2 187 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 SMAPO00193 183 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 VDRP11473 427 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 AIMP1Q12904 312 aaKnown RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 BATF3Q9NR55 127 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 TNRQ92752 1358 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 NEMFO60524 1076 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 KRT32Q14532 448 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 PGBD1Q96JS3 809 aa11.01□□□□□ -0.65
LINC01940-201ENST00000455228 TRMT1Q9NXH9 659 aaKnown RBP11.01□□□□□ -0.65
LINC01940-201ENST00000455228 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 CHUKO15111 745 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 PPFIA4O75335 1185 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 AP1G2O75843 785 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 ZNF24P17028 368 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 FNTAP49354 379 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 LRRC8AQ8IWT6 810 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 C3orf20Q8ND61 904 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 GOPCQ9HD26 462 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 F8VZ95 297 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 AHCYL1O43865 530 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 OAS2P29728 719 aaKnown RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 STX1AQ16623 288 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 KSR2Q6VAB6 950 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 MPRIPQ6WCQ1 1025 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 BRAPQ7Z569 592 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 NOL12Q9UGY1 213 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01940-201ENST00000455228 RHBDL3P58872 404 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 ZNF530Q6P9A1 599 aaPredicted RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 RBM43Q6ZSC3 357 aaKnown RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 ZCRB1Q8TBF4 217 aaKnown RBP11□□□□□ -0.65
LINC01940-201ENST00000455228 NEK1Q96PY6 1258 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 ADCY9O60503 1353 aa11□□□□□ -0.65
LINC01940-201ENST00000455228 PYGBP11216 843 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 LTKP29376 864 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 CCAR1Q8IX12 1150 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 SMCR8Q8TEV9 937 aaPredicted RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 TLR7Q9NYK1 1049 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 TMEM98Q9Y2Y6 226 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 USP16Q9Y5T5 823 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 GRM8O00222 908 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 CDC25BP30305 580 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 PSMC1P62191 440 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 SF3B2Q13435 895 aaKnown RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 MYLK4Q86YV6 388 aaPredicted RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 MFN1Q8IWA4 741 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 NALCNQ8IZF0 1738 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms