RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 SLC4A10Q6U841 1118 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 IL16Q14005 1332 aa12.51□□□□□ -0.41
CLCN4-204ENST00000454850 DLL1O00548 723 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 VAMP4O75379 141 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-204ENST00000454850 GJB1P08034 283 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 GJA8P48165 433 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 PPATQ06203 517 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
CLCN4-204ENST00000454850 METTL24Q5JXM2 366 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 ANKRD23Q86SG2 305 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-204ENST00000454850 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
CLCN4-204ENST00000454850 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-204ENST00000454850 MROH5Q6ZUA9 1318 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 UBXN2AP68543 259 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 HDLBPQ00341 1268 aaKnown RBP12.49□□□□□ -0.41
CLCN4-204ENST00000454850 PRKCZQ05513 592 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 FBXO33Q7Z6M2 555 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
CLCN4-204ENST00000454850 MAST3O60307 1309 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-204ENST00000454850 CYP2C8P10632 490 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 BCAMP50895 628 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 FCGRTP55899 365 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 TCP10Q12799 353 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
CLCN4-204ENST00000454850 UBE2Q1Q7Z7E8 422 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
CLCN4-204ENST00000454850 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 PRO3102Q9H379 93 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
CLCN4-204ENST00000454850 GABRQQ9UN88 632 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 DOCK1Q14185 1865 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
CLCN4-204ENST00000454850 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-204ENST00000454850 EVI5O60447 810 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 MOGSQ13724 837 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 KAZALD1Q96I82 304 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 PARK7Q99497 189 aaKnown RBP12.47□□□□□ -0.41
CLCN4-204ENST00000454850 BICC1Q9H694 974 aaKnown RBP12.47□□□□□ -0.41
CLCN4-204ENST00000454850 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
CLCN4-204ENST00000454850 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-204ENST00000454850 ELNP15502 786 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 FAM151AQ8WW52 585 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 LRCH3Q96II8 777 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
CLCN4-204ENST00000454850 ADCY3O60266 1144 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 PDE8BO95263 885 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
CLCN4-204ENST00000454850 BCRP11274 1271 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-204ENST00000454850 NFIAQ12857 509 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 HHIPL2Q6UWX4 724 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
CLCN4-204ENST00000454850 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
CLCN4-204ENST00000454850 ATAD5Q96QE3 1844 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 SGPL1O95470 568 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 INHAP05111 366 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 GPAT2Q6NUI2 795 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 CDC42EP5Q6NZY7 148 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 VGLL2Q8N8G2 317 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 DEFB118Q96PH6 123 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 MRIQ9BWK5 157 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 SUGT1Q9Y2Z0 365 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
CLCN4-204ENST00000454850 DDX60LQ5H9U9 1706 aaKnown RBP12.43□□□□□ -0.42
CLCN4-204ENST00000454850 IFIT1P09914 478 aaKnown RBP12.43□□□□□ -0.42
CLCN4-204ENST00000454850 FLT3LGP49771 235 aa12.43□□□□□ -0.42
CLCN4-204ENST00000454850 PUM3Q15397 648 aaKnown RBP12.43□□□□□ -0.42
CLCN4-204ENST00000454850 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
CLCN4-204ENST00000454850 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 CXCL11O14625 94 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
CLCN4-204ENST00000454850 RABL6Q3YEC7 729 aaPredicted RBP12.42□□□□□ -0.42
CLCN4-204ENST00000454850 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 ZFPM1Q8IX07 1006 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms