RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SPC25Q9HBM1 224 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 SH2B1Q9NRF2 756 aaPredicted RBP6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 TRIM33Q9UPN9 1127 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 UPK3BL1B0FP48 263 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 UPK3BL2E5RIL1 263 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 SOX1O00570 391 aaPredicted RBP6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 ST8SIA5O15466 376 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 GRIN3BO60391 1043 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 CPB1P15086 417 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 APPBP2Q92624 585 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 AAASQ9NRG9 546 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 GPR25O00155 361 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 TRIM37O94972 964 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 ITGA6P23229 1130 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 MASP1P48740 699 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 RPL6Q02878 288 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 LRRC14Q15048 493 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 FXNQ16595 210 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 C2orf27AQ580R0 203 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 GMCL1Q96IK5 515 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 UBE2OQ9C0C9 1292 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 LACRTQ9GZZ8 138 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 CBX8Q9HC52 389 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 SAMM50Q9Y512 469 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRR36Q9H6K5 1346 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 DNAJA2O60884 412 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SIN3BO75182 1162 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ECEL1O95672 775 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 GHRHP01286 108 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ACRP10323 421 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 IMPDH2P12268 514 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 EPHA1P21709 976 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 PCBP4P57723 403 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 INPP5AQ14642 412 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 TTC6Q86TZ1 520 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 FAM35AQ86V20 835 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZCRB1Q8TBF4 217 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 LPIN3Q9BQK8 851 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SMG9Q9H0W8 520 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 PFDN2Q9UHV9 154 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZMYM5Q9UJ78 669 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SLC6A14Q9UN76 642 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 LTBP3Q9NS15 1303 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 MEIS3P2A8K0S8 358 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PTPRAP18433 802 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 LMNB1P20700 586 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 ANAPC15P60006 121 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PPP2R5EQ16537 467 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C6orf15Q6UXA7 325 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C16orf86Q6ZW13 317 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 FAM178BQ8IXR5 827 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C19orf47Q8N9M1 422 aaKnown RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 THAP3Q8WTV1 239 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 TNFRSF25Q93038 417 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 NRSN2Q9GZP1 204 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRKAB1Q9Y478 270 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 CORINQ9Y5Q5 1042 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PARNO95453 639 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 BPNT1O95861 308 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 NEUROD1Q13562 356 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GRIK5Q16478 980 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PLEKHG6Q3KR16 790 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 MTERF2Q49AM1 385 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 DALRD3Q5D0E6 543 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 ARSHQ5FYA8 562 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 SCARA3Q6AZY7 606 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GPBAR1Q8TDU6 330 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 EMILIN2Q9BXX0 1053 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRR12Q9ULL5 1215 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PTCH2Q9Y6C5 1203 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 ADARB2-AS1A8MUL3 147 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 TM4SF5O14894 197 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PPP1R12AO14974 1030 aaPredicted RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 DDAH1O94760 285 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 HTR3BO95264 441 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 CTSBP07858 339 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 FAM153BP0C7A2 387 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 POU3F3P20264 500 aaPredicted RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 BAG6P46379 1132 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 IKBKEQ14164 716 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PCSK7Q16549 785 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PKDCCQ504Y2 493 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 LRFN4Q6PJG9 635 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 VWA5B2Q8N398 1253 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 TM9SF2Q99805 663 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 FAM126AQ9BYI3 521 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms