RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 DIXDC1Q155Q3 683 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 CDAN1Q8IWY9 1227 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 TMEM57Q8N5G2 664 aa26.7■■□□□ 1.86
C9orf3-208ENST00000451893 MTX1Q13505 466 aa26.69■■□□□ 1.86
C9orf3-208ENST00000451893 FKBP1CQ5VVH2 108 aa26.69■■□□□ 1.86
C9orf3-208ENST00000451893 SLF2Q8IX21 1173 aa26.69■■□□□ 1.86
C9orf3-208ENST00000451893 DAGLAQ9Y4D2 1042 aa26.69■■□□□ 1.86
C9orf3-208ENST00000451893 PKN2Q16513 984 aaKnown RBP26.68■■□□□ 1.86
C9orf3-208ENST00000451893 SPTY2D1Q68D10 685 aaPredicted RBP26.68■■□□□ 1.86
C9orf3-208ENST00000451893 ITPRIPQ8IWB1 547 aa26.68■■□□□ 1.86
C9orf3-208ENST00000451893 XAGE2Q96GT9 111 aa26.68■■□□□ 1.86
C9orf3-208ENST00000451893 WRNIP1Q96S55 665 aa26.68■■□□□ 1.86
C9orf3-208ENST00000451893 MYH2Q9UKX2 1941 aa26.68■■□□□ 1.86
C9orf3-208ENST00000451893 SALL1Q9NSC2 1324 aa26.67■■□□□ 1.86
C9orf3-208ENST00000451893 TCP10Q12799 353 aa26.67■■□□□ 1.86
C9orf3-208ENST00000451893 VGLL4Q14135 290 aa26.67■■□□□ 1.86
C9orf3-208ENST00000451893 OTUD5Q96G74 571 aa26.67■■□□□ 1.86
C9orf3-208ENST00000451893 USP40Q9NVE5 1235 aa26.67■■□□□ 1.86
C9orf3-208ENST00000451893 WDHD1O75717 1129 aaPredicted RBP26.66■■□□□ 1.86
C9orf3-208ENST00000451893 NOM1Q5C9Z4 860 aaKnown RBP26.66■■□□□ 1.86
C9orf3-208ENST00000451893 GTF2A2P52657 109 aa26.65■■□□□ 1.86
C9orf3-208ENST00000451893 MLLT1Q03111 559 aaPredicted RBP26.65■■□□□ 1.86
C9orf3-208ENST00000451893 RASGRF1Q13972 1273 aa26.65■■□□□ 1.86
C9orf3-208ENST00000451893 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.65■■□□□ 1.86
C9orf3-208ENST00000451893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.65■■□□□ 1.86
C9orf3-208ENST00000451893 CFHR5Q9BXR6 569 aa26.65■■□□□ 1.86
C9orf3-208ENST00000451893 ZNF341Q9BYN7 854 aa26.65■■□□□ 1.86
C9orf3-208ENST00000451893 LAMB1P07942 1786 aa26.64■■□□□ 1.86
C9orf3-208ENST00000451893 RPAP1Q9BWH6 1393 aaPredicted RBP26.64■■□□□ 1.86
C9orf3-208ENST00000451893 PNMA6EA0A0J9YXQ4 647 aa26.64■■□□□ 1.86
C9orf3-208ENST00000451893 IGF2BP3O00425 579 aaKnown RBP eCLIP26.64■■□□□ 1.86
C9orf3-208ENST00000451893 GJA5P36382 358 aa26.64■■□□□ 1.86
C9orf3-208ENST00000451893 CDC42EP5Q6NZY7 148 aa26.64■■□□□ 1.86
C9orf3-208ENST00000451893 FAM151AQ8WW52 585 aa26.64■■□□□ 1.86
C9orf3-208ENST00000451893 ERICH6Q7L0X2 663 aa26.63■■□□□ 1.85
C9orf3-208ENST00000451893 MIGA2Q7L4E1 593 aa26.63■■□□□ 1.85
C9orf3-208ENST00000451893 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.63■■□□□ 1.85
C9orf3-208ENST00000451893 CCL15-CCL14A0A0B4J2E2 113 aa26.62■■□□□ 1.85
C9orf3-208ENST00000451893 CCL15Q16663 113 aa26.62■■□□□ 1.85
C9orf3-208ENST00000451893 ZSCAN29Q8IWY8 852 aaPredicted RBP26.62■■□□□ 1.85
C9orf3-208ENST00000451893 RRP1P56182 461 aaKnown RBP26.61■■□□□ 1.85
C9orf3-208ENST00000451893 CNKSR2Q8WXI2 1034 aa26.61■■□□□ 1.85
C9orf3-208ENST00000451893 ZKSCAN4Q969J2 545 aaPredicted RBP26.61■■□□□ 1.85
C9orf3-208ENST00000451893 R3HDMLQ9H3Y0 253 aa26.61■■□□□ 1.85
C9orf3-208ENST00000451893 C1orf115Q9H7X2 142 aa26.61■■□□□ 1.85
C9orf3-208ENST00000451893 PDS5AQ29RF7 1337 aaKnown RBP26.61■■□□□ 1.85
C9orf3-208ENST00000451893 ERO1BQ86YB8 467 aa26.6■■□□□ 1.85
C9orf3-208ENST00000451893 ERO1AQ96HE7 468 aa26.6■■□□□ 1.85
C9orf3-208ENST00000451893 HPS5Q9UPZ3 1129 aa26.6■■□□□ 1.85
C9orf3-208ENST00000451893 SPDYE5A6NIY4 337 aa26.59■■□□□ 1.85
C9orf3-208ENST00000451893 SOX10P56693 466 aa26.59■■□□□ 1.85
C9orf3-208ENST00000451893 CRHR2Q13324 411 aa26.59■■□□□ 1.85
C9orf3-208ENST00000451893 TAF1CQ15572 869 aaPredicted RBP26.59■■□□□ 1.85
C9orf3-208ENST00000451893 TRIM17Q9Y577 477 aa26.59■■□□□ 1.85
C9orf3-208ENST00000451893 SURF6O75683 361 aaKnown RBP26.58■■□□□ 1.85
C9orf3-208ENST00000451893 GSTO1P78417 241 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 NFIAQ12857 509 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 TTC39AQ5SRH9 613 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 FBXO46Q6PJ61 603 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-208ENST00000451893 SPATA5Q8NB90 893 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 ZFYVE28Q9HCC9 887 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 RAI14Q9P0K7 980 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 SNCAIPQ9Y6H5 919 aa26.58■■□□□ 1.85
C9orf3-208ENST00000451893 TESPA1A2RU30 521 aaPredicted RBP26.57■■□□□ 1.84
C9orf3-208ENST00000451893 UQCRFS1P1P0C7P4 283 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 CETPP11597 493 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 BTDP43251 543 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 SNAPC2Q13487 334 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 CCDC158Q5M9N0 1113 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 NOL10Q9BSC4 688 aaKnown RBP26.57■■□□□ 1.84
C9orf3-208ENST00000451893 DOCK2Q92608 1830 aa26.57■■□□□ 1.84
C9orf3-208ENST00000451893 LDHCP07864 332 aa26.56■■□□□ 1.84
C9orf3-208ENST00000451893 RGS3P49796 1198 aa26.56■■□□□ 1.84
C9orf3-208ENST00000451893 ATP8B2P98198 1209 aa26.56■■□□□ 1.84
C9orf3-208ENST00000451893 PICALMQ13492 652 aa26.56■■□□□ 1.84
C9orf3-208ENST00000451893 LRP2BPQ9P2M1 347 aa26.56■■□□□ 1.84
C9orf3-208ENST00000451893 ZBTB22O15209 634 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 BRI3BPQ8WY22 251 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 MS4A4AQ96JQ5 239 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 PTPN18Q99952 460 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 HMG20BQ9P0W2 317 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 MROH7-TTC4A0A0A0MT08 1334 aa26.55■■□□□ 1.84
C9orf3-208ENST00000451893 MS4A1P11836 297 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 INPP5BP32019 993 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 SP3Q02447 781 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 MECOMQ03112 1051 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 PPIL2Q13356 520 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 ARHGEF6Q15052 776 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 CD99L2Q8TCZ2 262 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 FAM198AQ9UFP1 575 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 GAKO14976 1311 aa26.54■■□□□ 1.84
C9orf3-208ENST00000451893 ENTPD3O75355 529 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 RGS19P49795 217 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 PPATQ06203 517 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 POLA2Q14181 598 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 TNNI3KQ59H18 835 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 FPGT-TNNI3KV9GXZ4 949 aa26.53■■□□□ 1.84
C9orf3-208ENST00000451893 IRF6O14896 467 aa26.52■■□□□ 1.84
C9orf3-208ENST00000451893 ARID4AP29374 1257 aaPredicted RBP26.52■■□□□ 1.84
C9orf3-208ENST00000451893 PI16Q6UXB8 463 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms