RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 UBE2Q2LH0YL09 131 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 UQCRFS1P1P0C7P4 283 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 PFKFB1P16118 471 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 CTDSPL2Q05D32 466 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 VPS37DQ86XT2 251 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 SPATA5Q8NB90 893 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 TNNT1P13805 278 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 TPD52L1Q16890 204 aaPredicted RBP25.73■■□□□ 1.71
TTC3-210ENST00000450533 KRT40Q6A162 431 aa25.73■■□□□ 1.71
TTC3-210ENST00000450533 EPB41L4AQ9HCS5 686 aaPredicted RBP25.73■■□□□ 1.71
TTC3-210ENST00000450533 SLC3A2P08195 630 aaKnown RBP25.72■■□□□ 1.71
TTC3-210ENST00000450533 FGFR2P21802 821 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 RASGRF1Q13972 1273 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 IGDCC4Q8TDY8 1250 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 ANKRD36CQ5JPF3 1778 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 ZBTB43O43298 467 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 MBD4O95243 580 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 GNL2Q13823 731 aaKnown RBP25.72■■□□□ 1.71
TTC3-210ENST00000450533 ISM2Q6H9L7 571 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 ZNF34Q8IZ26 560 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 ARMT1Q9H993 441 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 SEC31BQ9NQW1 1179 aa25.72■■□□□ 1.71
TTC3-210ENST00000450533 TMEM67Q5HYA8 995 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 LY9Q9HBG7 655 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 ERVV-1B6SEH8 477 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 EXOC5O00471 708 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 IL6STP40189 918 aaPredicted RBP25.71■■□□□ 1.71
TTC3-210ENST00000450533 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 IFNL3Q8IZI9 196 aa25.71■■□□□ 1.71
TTC3-210ENST00000450533 MROH5Q6ZUA9 1318 aa25.7■■□□□ 1.71
TTC3-210ENST00000450533 CCDC69A6NI79 296 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 USP27XA6NNY8 438 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 CDKL5O76039 1030 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 SLC39A14Q15043 492 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 STK11IPQ8N1F8 1099 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 NAPBQ9H115 298 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 TACC3Q9Y6A5 838 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 SLIT2O94813 1529 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 STRCQ7RTU9 1775 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 GOLGA8AA7E2F4 631 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 RANBP6O60518 1105 aaKnown RBP25.7■■□□□ 1.7
TTC3-210ENST00000450533 SKILP12757 684 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 CMA1P23946 247 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 CPLX2Q6PUV4 134 aaKnown RBP25.7■■□□□ 1.7
TTC3-210ENST00000450533 TMEM87BQ96K49 555 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 ZSWIM5Q9P217 1185 aa25.7■■□□□ 1.7
TTC3-210ENST00000450533 DISP2A7MBM2 1401 aa25.69■■□□□ 1.7
TTC3-210ENST00000450533 PATL2C9JE40 543 aaKnown RBP25.69■■□□□ 1.7
TTC3-210ENST00000450533 PRKAB2O43741 272 aa25.69■■□□□ 1.7
TTC3-210ENST00000450533 SLC5A1P13866 664 aa25.69■■□□□ 1.7
TTC3-210ENST00000450533 IARSP41252 1262 aaKnown RBP25.69■■□□□ 1.7
TTC3-210ENST00000450533 NTRK3Q16288 839 aa25.69■■□□□ 1.7
TTC3-210ENST00000450533 MPHOSPH8Q99549 860 aa25.69■■□□□ 1.7
TTC3-210ENST00000450533 FAM217BQ9NTX9 383 aaPredicted RBP25.69■■□□□ 1.7
TTC3-210ENST00000450533 MAP3K12Q12852 859 aa25.68■■□□□ 1.7
TTC3-210ENST00000450533 IFIT3O14879 490 aaKnown RBP25.68■■□□□ 1.7
TTC3-210ENST00000450533 NBPF11Q86T75 865 aa25.68■■□□□ 1.7
TTC3-210ENST00000450533 RRP12Q5JTH9 1297 aaKnown RBP25.67■■□□□ 1.7
TTC3-210ENST00000450533 ZNF592Q92610 1267 aa25.67■■□□□ 1.7
TTC3-210ENST00000450533 CLIC6Q96NY7 704 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 ZKSCAN3Q9BRR0 538 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 SLC26A6Q9BXS9 759 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 TOMM22Q9NS69 142 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 SMC2O95347 1197 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 SYKP43405 635 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 BCAMP50895 628 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 CCZ1BP86790 482 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 CCZ1P86791 482 aaPredicted RBP25.66■■□□□ 1.7
TTC3-210ENST00000450533 SLC12A7Q9Y666 1083 aa25.66■■□□□ 1.7
TTC3-210ENST00000450533 NLRP12P59046 1061 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 SHC4Q6S5L8 630 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 GSG1L2A8MUP6 293 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 NEMFO60524 1076 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 RBM6P78332 1123 aaKnown RBP25.65■■□□□ 1.7
TTC3-210ENST00000450533 ALX1Q15699 326 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 SGMS1Q86VZ5 419 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 XPO4Q9C0E2 1151 aaKnown RBP25.65■■□□□ 1.7
TTC3-210ENST00000450533 IFNKQ9P0W0 207 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 NHSL1Q5SYE7 1610 aa25.65■■□□□ 1.7
TTC3-210ENST00000450533 TRIM29Q14134 588 aa25.64■■□□□ 1.7
TTC3-210ENST00000450533 PTPAQ15257 358 aa25.64■■□□□ 1.7
TTC3-210ENST00000450533 LCORLQ8N3X6 602 aa25.64■■□□□ 1.7
TTC3-210ENST00000450533 BCL11BQ9C0K0 894 aaPredicted RBP25.64■■□□□ 1.7
TTC3-210ENST00000450533 TRMT1Q9NXH9 659 aaKnown RBP25.64■■□□□ 1.7
TTC3-210ENST00000450533 CTIFO43310 598 aaKnown RBP25.64■■□□□ 1.69
TTC3-210ENST00000450533 MAP3K14Q99558 947 aa25.64■■□□□ 1.69
TTC3-210ENST00000450533 EIF5P55010 431 aaKnown RBP25.63■■□□□ 1.69
TTC3-210ENST00000450533 CCDC82Q8N4S0 544 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 MIGA1Q8NAN2 632 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 BPIFA3Q9BQP9 254 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 SMTNL1A8MU46 457 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 GUCY1A2P33402 732 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 TDO2P48775 406 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 AKNAD1Q5T1N1 836 aa25.63■■□□□ 1.69
TTC3-210ENST00000450533 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.63■■□□□ 1.69
TTC3-210ENST00000450533 CCDC94Q9BW85 323 aaPredicted RBP25.63■■□□□ 1.69
TTC3-210ENST00000450533 IQSEC3Q9UPP2 1182 aaPredicted RBP25.63■■□□□ 1.69
TTC3-210ENST00000450533 INTS5Q6P9B9 1019 aaKnown RBP25.62■■□□□ 1.69
TTC3-210ENST00000450533 MFSD6Q6ZSS7 791 aa25.62■■□□□ 1.69
TTC3-210ENST00000450533 ACSBG1Q96GR2 724 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms