RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 VSTM4Q8IW00 320 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 TCEANC2Q96MN5 208 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 RHOXF2Q9BQY4 288 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 CDC23Q9UJX2 597 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 CAPN7Q9Y6W3 813 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 AGLP35573 1532 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 IKBKBO14920 756 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 COL9A3Q14050 684 aaPredicted RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 SAFB2Q14151 953 aaKnown RBP eCLIP9.85□□□□□ -0.83
LSM5-208ENST00000450169 PREPLQ4J6C6 727 aaPredicted RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 G2E3Q7L622 706 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 IGSF22Q8N9C0 903 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 CD248Q9HCU0 757 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 RBM8AQ9Y5S9 174 aaKnown RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 CRYBG1Q9Y4K1 1723 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 SHTN1A0MZ66 631 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 BIN1O00499 593 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 CHL1O00533 1208 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 STX10O60499 249 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 FBLN1P23142 703 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 IL13P35225 146 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 SEMA3FQ13275 785 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 TOB2Q14106 344 aaPredicted RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 KARSQ15046 597 aaKnown RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 MRPS27Q92552 414 aaKnown RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 DPF2Q92785 391 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 TRIM6Q9C030 488 aaPredicted RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 ODF2LQ9ULJ1 636 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 TMCO5BA8MYB1 307 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 MYO1FO00160 1098 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 IRAK1P51617 712 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 INHBEP58166 350 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 NLRP12P59046 1061 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 TUBB2AQ13885 445 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 CRYMQ14894 314 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 AMOTL1Q8IY63 956 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 FNBP4Q8N3X1 1017 aaPredicted RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 OXER1Q8TDS5 423 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 MS4A3Q96HJ5 214 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 CALR3Q96L12 384 aaKnown RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 TUBB2BQ9BVA1 445 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 ALDH8A1Q9H2A2 487 aaPredicted RBP9.84□□□□□ -0.83
LSM5-208ENST00000450169 HSD3B7Q9H2F3 369 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 KAT14Q9H8E8 782 aa9.84□□□□□ -0.83
LSM5-208ENST00000450169 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
LSM5-208ENST00000450169 FNTAP49354 379 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
LSM5-208ENST00000450169 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 RHPN1Q8TCX5 695 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 BCAS4Q8TDM0 211 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 XAGE2Q96GT9 111 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 ZNF396Q96N95 335 aaPredicted RBP9.83□□□□□ -0.84
LSM5-208ENST00000450169 IRX2Q9BZI1 471 aaPredicted RBP9.83□□□□□ -0.84
LSM5-208ENST00000450169 SH3BP1Q9Y3L3 701 aa9.83□□□□□ -0.84
LSM5-208ENST00000450169 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 SLC27A2O14975 620 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 FSBPO95073 299 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 SSR1P43307 286 aaKnown RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 ATL3Q6DD88 541 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 HDGFL2Q7Z4V5 671 aaPredicted RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 FAM76AQ8TAV0 307 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 DESI2Q9BSY9 194 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 ARHGEF10O15013 1369 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 MYH15Q9Y2K3 1946 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 A0A1B0GVL5 298 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 CTAGE15A4D2H0 777 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 TMEM232C9JQI7 657 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 RAD21O60216 631 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 GLRX3O76003 335 aaKnown RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 KIAA0754O94854 1291 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 SLC3A2P08195 630 aaKnown RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 CTAGE8P0CG41 777 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 NDUFA8P51970 172 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 KIF4BQ2VIQ3 1234 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 WDR93Q6P2C0 686 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 CTAGE6Q86UF2 777 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 CTAGE4Q8IX94 777 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 PHOX2BQ99453 314 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 MRPL44Q9H9J2 332 aaKnown RBP9.82□□□□□ -0.84
LSM5-208ENST00000450169 HPCAL4Q9UM19 191 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 NEDD4P46934 1319 aa9.82□□□□□ -0.84
LSM5-208ENST00000450169 KIF5CO60282 957 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 CCDC175P0C221 793 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
LSM5-208ENST00000450169 PTPN21Q16825 1174 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 WLSQ5T9L3 541 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 NAA16Q6N069 864 aaPredicted RBP9.81□□□□□ -0.84
LSM5-208ENST00000450169 NBPF10Q6P3W6 841 aaKnown RBP9.81□□□□□ -0.84
LSM5-208ENST00000450169 PDILTQ8N807 584 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms