RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 NAA16Q6N069 864 aaPredicted RBP14.82□□□□□ -0.04
NUP85-202ENST00000449421 STOX1Q6ZVD7 989 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 ZNF804AQ7Z570 1209 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 RTKN2Q8IZC4 609 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 WDR66Q8TBY9 1149 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 BRF1Q92994 677 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 GTF3C6Q969F1 213 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
NUP85-202ENST00000449421 RTFDC1Q9BY42 306 aaPredicted RBP14.82□□□□□ -0.04
NUP85-202ENST00000449421 TMX4Q9H1E5 349 aaPredicted RBP14.82□□□□□ -0.04
NUP85-202ENST00000449421 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
NUP85-202ENST00000449421 BCS1LQ9Y276 419 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 TAF6LQ9Y6J9 622 aa14.82□□□□□ -0.04
NUP85-202ENST00000449421 DUOX1Q9NRD9 1551 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 LARGE1O95461 756 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 EVCP57679 992 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 GPSM2P81274 684 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
NUP85-202ENST00000449421 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 OLFM4Q6UX06 510 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 TMEM87BQ96K49 555 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 MTA3Q9BTC8 594 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 KRT23Q9C075 422 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
NUP85-202ENST00000449421 SLC4A4Q9Y6R1 1079 aa14.81□□□□□ -0.04
NUP85-202ENST00000449421 FOXP2O15409 715 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 GSTO1P78417 241 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 PKP1Q13835 747 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 SLC51AQ86UW1 340 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 CERS3Q8IU89 383 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 MPNDQ8N594 471 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 NECAB1Q8N987 351 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 TCEANC2Q96MN5 208 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 PSMD1Q99460 953 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 DDX49Q9Y6V7 483 aaKnown RBP14.8□□□□□ -0.04
NUP85-202ENST00000449421 SALL1Q9NSC2 1324 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 DOCK2Q92608 1830 aa14.8□□□□□ -0.04
NUP85-202ENST00000449421 PRC1O43663 620 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 ABCB7O75027 752 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 MBD3O95983 291 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 LDHCP07864 332 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
NUP85-202ENST00000449421 YBX3P16989 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
NUP85-202ENST00000449421 TDO2P48775 406 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 NT5C2P49902 561 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 HAND2P61296 217 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 KLHL40Q2TBA0 621 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 MB21D2Q8IYB1 491 aaPredicted RBP14.79□□□□□ -0.04
NUP85-202ENST00000449421 FAM184AQ8NB25 1140 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 VPS33BQ9H267 617 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 ARMT1Q9H993 441 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 LTBP3Q9NS15 1303 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 GGA1Q9UJY5 639 aa14.79□□□□□ -0.04
NUP85-202ENST00000449421 NSFL1CQ9UNZ2 370 aaKnown RBP14.79□□□□□ -0.04
NUP85-202ENST00000449421 IRS2Q9Y4H2 1338 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 GSG1L2A8MUP6 293 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 F13A1P00488 732 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 DSG3P32926 999 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 STK3Q13188 491 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 L1TD1Q5T7N2 865 aaKnown RBP14.78□□□□□ -0.04
NUP85-202ENST00000449421 DPP8Q6V1X1 898 aaPredicted RBP14.78□□□□□ -0.04
NUP85-202ENST00000449421 MFSD6Q6ZSS7 791 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 TMTC2Q8N394 836 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 RGS22Q8NE09 1264 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
NUP85-202ENST00000449421 TBC1D16Q8TBP0 767 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 LMBRD1Q9NUN5 540 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 POLLQ9UGP5 575 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 IQSEC3Q9UPP2 1182 aaPredicted RBP14.78□□□□□ -0.04
NUP85-202ENST00000449421 SBF1O95248 1867 aa14.78□□□□□ -0.04
NUP85-202ENST00000449421 WTIPA6NIX2 430 aaPredicted RBP14.77□□□□□ -0.05
NUP85-202ENST00000449421 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.05
NUP85-202ENST00000449421 SART3Q15020 963 aaKnown RBP14.77□□□□□ -0.05
NUP85-202ENST00000449421 AKNAD1Q5T1N1 836 aa14.77□□□□□ -0.05
NUP85-202ENST00000449421 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.05
NUP85-202ENST00000449421 SUPT20HQ8NEM7 779 aa14.77□□□□□ -0.05
NUP85-202ENST00000449421 NOL10Q9BSC4 688 aaKnown RBP14.77□□□□□ -0.05
NUP85-202ENST00000449421 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 NFKBIEO00221 500 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 PDIA3P30101 505 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 SYNE3Q6ZMZ3 975 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 LCORLQ8N3X6 602 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 SMARCC2Q8TAQ2 1214 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 NSUN4Q96CB9 384 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 CRNKL1Q9BZJ0 848 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 ANAPC4Q9UJX5 808 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 ANGEL1Q9UNK9 670 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 MTMR6Q9Y217 621 aa14.76□□□□□ -0.05
NUP85-202ENST00000449421 DICER1Q9UPY3 1922 aaKnown RBP14.76□□□□□ -0.05
NUP85-202ENST00000449421 ERICH2A1L162 156 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms