RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PATL2C9JE40 543 aaKnown RBP23.04■■□□□ 1.28
RPS28-202ENST00000449223 TNIP1Q15025 636 aa23.04■■□□□ 1.28
RPS28-202ENST00000449223 KIF2CQ99661 725 aa23.04■■□□□ 1.28
RPS28-202ENST00000449223 ADAMTSL1Q8N6G6 1762 aa23.04■■□□□ 1.28
RPS28-202ENST00000449223 PLCG2P16885 1265 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 TSGA10IPQ3SY00 556 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 GIMAP6Q6P9H5 292 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 TEKT1Q969V4 418 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.281e-6■□□□□ 10
RPS28-202ENST00000449223 GSG1L2A8MUP6 293 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 RPS12P25398 132 aaKnown RBP23.03■■□□□ 1.28
RPS28-202ENST00000449223 DYNLL1P63167 89 aaKnown RBP23.03■■□□□ 1.28
RPS28-202ENST00000449223 ECM29Q5VYK3 1845 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 KIAA0825Q8IV33 1275 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 ZDHHC15Q96MV8 337 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 CTNNA3Q9UI47 895 aa23.03■■□□□ 1.28
RPS28-202ENST00000449223 FGAP02671 866 aa23.02■■□□□ 1.28
RPS28-202ENST00000449223 RNF20Q5VTR2 975 aa23.02■■□□□ 1.28
RPS28-202ENST00000449223 CREB3L3Q68CJ9 461 aa23.02■■□□□ 1.28
RPS28-202ENST00000449223 NOL10Q9BSC4 688 aaKnown RBP23.02■■□□□ 1.28
RPS28-202ENST00000449223 CRNKL1Q9BZJ0 848 aaKnown RBP23.02■■□□□ 1.28
RPS28-202ENST00000449223 EPB41L4AQ9HCS5 686 aaPredicted RBP23.02■■□□□ 1.28
RPS28-202ENST00000449223 SLC4A4Q9Y6R1 1079 aa23.02■■□□□ 1.28
RPS28-202ENST00000449223 DDX60LQ5H9U9 1706 aaKnown RBP23.01■■□□□ 1.27
RPS28-202ENST00000449223 F8W031 263 aaPredicted RBP23.01■■□□□ 1.27
RPS28-202ENST00000449223 SLC27A2O14975 620 aa23.01■■□□□ 1.27
RPS28-202ENST00000449223 BTDP43251 543 aa23.01■■□□□ 1.27
RPS28-202ENST00000449223 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
RPS28-202ENST00000449223 RHBDL3P58872 404 aa23.01■■□□□ 1.27
RPS28-202ENST00000449223 IFNL3Q8IZI9 196 aa23.01■■□□□ 1.27
RPS28-202ENST00000449223 PALD1Q9ULE6 856 aa23.01■■□□□ 1.27
RPS28-202ENST00000449223 GRIN3BO60391 1043 aa23■■□□□ 1.27
RPS28-202ENST00000449223 CRKP46108 304 aa23■■□□□ 1.27
RPS28-202ENST00000449223 IL27Q8NEV9 243 aa23■■□□□ 1.27
RPS28-202ENST00000449223 NACAP1Q9BZK3 213 aa23■■□□□ 1.27
RPS28-202ENST00000449223 ATP8A2Q9NTI2 1148 aa23■■□□□ 1.27
RPS28-202ENST00000449223 PRKAB2O43741 272 aa22.99■■□□□ 1.27
RPS28-202ENST00000449223 APOBEC3HQ6NTF7 200 aaKnown RBP22.99■■□□□ 1.27
RPS28-202ENST00000449223 RASEFQ8IZ41 740 aa22.99■■□□□ 1.27
RPS28-202ENST00000449223 MKRN1Q9UHC7 482 aaKnown RBP22.99■■□□□ 1.27
RPS28-202ENST00000449223 SNX14Q9Y5W7 946 aa22.99■■□□□ 1.27
RPS28-202ENST00000449223 NAV1Q8NEY1 1877 aa22.99■■□□□ 1.27
RPS28-202ENST00000449223 CYP21A2P08686 494 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 ZKSCAN1P17029 563 aaPredicted RBP22.98■■□□□ 1.27
RPS28-202ENST00000449223 SCNN1DP51172 638 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 DPF2Q92785 391 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 LAMB1P07942 1786 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 BAZ2AQ9UIF9 1905 aaKnown RBP22.98■■□□□ 1.27
RPS28-202ENST00000449223 MTMR14Q8NCE2 650 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 SH3RF3Q8TEJ3 882 aaPredicted RBP22.98■■□□□ 1.27
RPS28-202ENST00000449223 HDAC9Q9UKV0 1011 aa22.98■■□□□ 1.27
RPS28-202ENST00000449223 ZBTB12Q9Y330 459 aaPredicted RBP22.98■■□□□ 1.27
RPS28-202ENST00000449223 APPP05067 770 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 USP17L8P0C7I0 530 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 GPR162Q16538 588 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 OGFOD1Q8N543 542 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 SDR42E1Q8WUS8 393 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 TM6SF1Q9BZW5 370 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 NAPBQ9H115 298 aa22.97■■□□□ 1.27
RPS28-202ENST00000449223 DCP1AQ9NPI6 582 aaPredicted RBP22.97■■□□□ 1.27
RPS28-202ENST00000449223 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
RPS28-202ENST00000449223 ZC3H4Q9UPT8 1303 aaKnown RBP22.96■■□□□ 1.27
RPS28-202ENST00000449223 ZNF280AP59817 542 aaPredicted RBP22.96■■□□□ 1.27
RPS28-202ENST00000449223 KRT32Q14532 448 aa22.96■■□□□ 1.27
RPS28-202ENST00000449223 IMMTQ16891 758 aaKnown RBP22.96■■□□□ 1.27
RPS28-202ENST00000449223 RABEP1Q15276 862 aa22.95■■□□□ 1.26
RPS28-202ENST00000449223 GPC2Q8N158 579 aa22.95■■□□□ 1.26
RPS28-202ENST00000449223 SBK1Q52WX2 424 aa22.94■■□□□ 1.26
RPS28-202ENST00000449223 RNF181Q9P0P0 153 aa22.94■■□□□ 1.26
RPS28-202ENST00000449223 ANAPC4Q9UJX5 808 aa22.94■■□□□ 1.26
RPS28-202ENST00000449223 NPM3O75607 178 aaKnown RBP22.93■■□□□ 1.26
RPS28-202ENST00000449223 TDO2P48775 406 aa22.93■■□□□ 1.26
RPS28-202ENST00000449223 CFAP100Q494V2 611 aa22.93■■□□□ 1.26
RPS28-202ENST00000449223 TEX11Q8IYF3 940 aa22.93■■□□□ 1.26
RPS28-202ENST00000449223 DDRGK1Q96HY6 314 aa22.93■■□□□ 1.26
RPS28-202ENST00000449223 ZBED3Q96IU2 234 aaPredicted RBP22.93■■□□□ 1.26
RPS28-202ENST00000449223 ARPP21Q9UBL0 812 aaPredicted RBP22.93■■□□□ 1.26
RPS28-202ENST00000449223 TAF6LQ9Y6J9 622 aa22.93■■□□□ 1.26
RPS28-202ENST00000449223 SPDYE2BA6NHP3 402 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 ZNF213O14771 459 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 WDHD1O75717 1129 aaPredicted RBP22.92■■□□□ 1.26
RPS28-202ENST00000449223 SPDYE6P0CI01 402 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 C9orf131Q5VYM1 1079 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 CDC42EP5Q6NZY7 148 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 FLT1P17948 1338 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 MYH1P12882 1939 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 GMPSP49915 693 aaPredicted RBP22.92■■□□□ 1.26
RPS28-202ENST00000449223 IDI2Q9BXS1 227 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 NBPF3Q9H094 633 aa22.92■■□□□ 1.26
RPS28-202ENST00000449223 PSMA5P28066 241 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 ANP32AP39687 249 aaKnown RBP22.91■■□□□ 1.26
RPS28-202ENST00000449223 USP5P45974 858 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 ADCK5Q3MIX3 580 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 CTR9Q6PD62 1173 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 TGFBRAP1Q8WUH2 860 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 USP40Q9NVE5 1235 aa22.91■■□□□ 1.26
RPS28-202ENST00000449223 ROBO3Q96MS0 1386 aa22.9■■□□□ 1.26
RPS28-202ENST00000449223 RBM5P52756 815 aaKnown RBP eCLIP22.9■■□□□ 1.26
RPS28-202ENST00000449223 PRMT6Q96LA8 375 aaPredicted RBP22.9■■□□□ 1.26
RPS28-202ENST00000449223 ZSWIM6Q9HCJ5 1215 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms