RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GNAT2P19087 354 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 PTH1RQ03431 593 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 OGFOD1Q8N543 542 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
SHMT2-203ENST00000449049 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 FOXP2O15409 715 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
SHMT2-203ENST00000449049 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-203ENST00000449049 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
SHMT2-203ENST00000449049 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 PLCG2P16885 1265 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
SHMT2-203ENST00000449049 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-203ENST00000449049 FOCADQ5VW36 1801 aa16.83■□□□□ 0.29
SHMT2-203ENST00000449049 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.29
SHMT2-203ENST00000449049 CDK5RAP2Q96SN8 1893 aa16.83■□□□□ 0.29
SHMT2-203ENST00000449049 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
SHMT2-203ENST00000449049 RHBDL3P58872 404 aa16.83■□□□□ 0.28
SHMT2-203ENST00000449049 CFAP100Q494V2 611 aa16.83■□□□□ 0.28
SHMT2-203ENST00000449049 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
SHMT2-203ENST00000449049 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-203ENST00000449049 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
SHMT2-203ENST00000449049 SLC4A4Q9Y6R1 1079 aa16.82■□□□□ 0.28
SHMT2-203ENST00000449049 MICALL2Q8IY33 904 aa16.82■□□□□ 0.28
SHMT2-203ENST00000449049 ZBED3Q96IU2 234 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-203ENST00000449049 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
SHMT2-203ENST00000449049 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
SHMT2-203ENST00000449049 ZMYM6O95789 1325 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 GSG1L2A8MUP6 293 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 PRKAB2O43741 272 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-203ENST00000449049 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHMT2-203ENST00000449049 MYOZ2Q9NPC6 264 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 GPRC5DQ9NZD1 345 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
SHMT2-203ENST00000449049 DDX60LQ5H9U9 1706 aaKnown RBP16.81■□□□□ 0.28
SHMT2-203ENST00000449049 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 ALX1Q15699 326 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 DPY19L2Q6NUT2 758 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
SHMT2-203ENST00000449049 EPB41L4AQ9HCS5 686 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-203ENST00000449049 DLGAP5Q15398 846 aa16.8■□□□□ 0.28
SHMT2-203ENST00000449049 GIMAP6Q6P9H5 292 aa16.8■□□□□ 0.28
SHMT2-203ENST00000449049 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
SHMT2-203ENST00000449049 PRMT6Q96LA8 375 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-203ENST00000449049 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
SHMT2-203ENST00000449049 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-203ENST00000449049 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
SHMT2-203ENST00000449049 NECTIN1Q15223 517 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-203ENST00000449049 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 HSPA4P34932 840 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
SHMT2-203ENST00000449049 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
SHMT2-203ENST00000449049 H7C1D1 291 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 FGAP02671 866 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 APPP05067 770 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 RBM25P49756 843 aaKnown RBP16.78■□□□□ 0.28
SHMT2-203ENST00000449049 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-203ENST00000449049 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 LAMB1P07942 1786 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-203ENST00000449049 TGFBRAP1Q8WUH2 860 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
SHMT2-203ENST00000449049 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
SHMT2-203ENST00000449049 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
SHMT2-203ENST00000449049 FLT1P17948 1338 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 WNT10BO00744 389 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 EGFRP00533 1210 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 MCCP23508 829 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 USP5P45974 858 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 KCNB2Q92953 911 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 NAPBQ9H115 298 aa16.77■□□□□ 0.28
SHMT2-203ENST00000449049 EPS15P42566 896 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 SCN4AP35499 1836 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
SHMT2-203ENST00000449049 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
SHMT2-203ENST00000449049 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
SHMT2-203ENST00000449049 TDO2P48775 406 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 DDRGK1Q96HY6 314 aa16.76■□□□□ 0.27
SHMT2-203ENST00000449049 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
SHMT2-203ENST00000449049 SLC27A2O14975 620 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 MYO1BO43795 1136 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms