RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 IL25Q9H293 177 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
RCL1-208ENST00000448872 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
RCL1-208ENST00000448872 CACNB3P54284 484 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
RCL1-208ENST00000448872 ZMYM1Q5SVZ6 1142 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 CDC42EP5Q6NZY7 148 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 CCDC129Q6ZRS4 1044 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 MTMR14Q8NCE2 650 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 SH3RF3Q8TEJ3 882 aaPredicted RBP14.31□□□□□ -0.12
RCL1-208ENST00000448872 APPBP2Q92624 585 aa14.31□□□□□ -0.12
RCL1-208ENST00000448872 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
RCL1-208ENST00000448872 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
RCL1-208ENST00000448872 MBD4O95243 580 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 LDHCP07864 332 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
RCL1-208ENST00000448872 CHMLP26374 656 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 RHBDL3P58872 404 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 CWC27Q6UX04 472 aaKnown RBP14.3□□□□□ -0.12
RCL1-208ENST00000448872 SLF2Q8IX21 1173 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 ARMT1Q9H993 441 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 GPBP1L1Q9HC44 474 aaPredicted RBP14.3□□□□□ -0.12
RCL1-208ENST00000448872 USP40Q9NVE5 1235 aa14.3□□□□□ -0.12
RCL1-208ENST00000448872 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
RCL1-208ENST00000448872 ZNF589Q86UQ0 364 aaPredicted RBP14.29□□□□□ -0.12
RCL1-208ENST00000448872 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
RCL1-208ENST00000448872 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
RCL1-208ENST00000448872 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 PRKAB2O43741 272 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 IGSF3O75054 1194 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 MMP14P50281 582 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 PPP4CP60510 307 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 NFIAQ12857 509 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
RCL1-208ENST00000448872 ANGEL2Q5VTE6 544 aaKnown RBP14.28□□□□□ -0.12
RCL1-208ENST00000448872 USP50Q70EL3 339 aaPredicted RBP14.28□□□□□ -0.12
RCL1-208ENST00000448872 ZNF784Q8NCA9 323 aaPredicted RBP14.28□□□□□ -0.12
RCL1-208ENST00000448872 GGA3Q9NZ52 723 aa14.28□□□□□ -0.12
RCL1-208ENST00000448872 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 GPAA1O43292 621 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 WDHD1O75717 1129 aaPredicted RBP14.27□□□□□ -0.12
RCL1-208ENST00000448872 BAG3O95817 575 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 DLK2Q6UY11 383 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 AIDAQ96BJ3 306 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 VEZTQ9HBM0 779 aa14.27□□□□□ -0.12
RCL1-208ENST00000448872 DDX4Q9NQI0 724 aaKnown RBP14.27□□□□□ -0.12
RCL1-208ENST00000448872 PSME4Q14997 1843 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 CDC45O75419 566 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 MCMDC2Q4G0Z9 681 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 TMED8Q6PL24 325 aaPredicted RBP14.26□□□□□ -0.13
RCL1-208ENST00000448872 PNMA8AQ86V59 439 aaPredicted RBP14.26□□□□□ -0.13
RCL1-208ENST00000448872 ZFPM1Q8IX07 1006 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 TEX11Q8IYF3 940 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 STRBPQ96SI9 672 aaKnown RBP14.26□□□□□ -0.13
RCL1-208ENST00000448872 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
RCL1-208ENST00000448872 HELLSQ9NRZ9 838 aa14.26□□□□□ -0.13
RCL1-208ENST00000448872 HIP1O00291 1037 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 KIF3CO14782 793 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 MYO1BO43795 1136 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 PICALMQ13492 652 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 VPS53Q5VIR6 699 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 SDR42E1Q8WUS8 393 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 FAM198AQ9UFP1 575 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 ADM5C9JUS6 153 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 FOXP2O15409 715 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 TCP10Q12799 353 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 MAP1SQ66K74 1059 aaPredicted RBP14.25□□□□□ -0.13
RCL1-208ENST00000448872 TICAM2Q86XR7 235 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 SLC4A4Q9Y6R1 1079 aa14.25□□□□□ -0.13
RCL1-208ENST00000448872 PRAMEF18Q5VWM3 479 aa14.24□□□□□ -0.13
RCL1-208ENST00000448872 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
RCL1-208ENST00000448872 PGAP2Q9UHJ9 254 aa14.24□□□□□ -0.13
RCL1-208ENST00000448872 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
RCL1-208ENST00000448872 DOCK2Q92608 1830 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 SGSM2O43147 1006 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 PLCG2P16885 1265 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 USP5P45974 858 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 EVX2Q03828 476 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 RASA3Q14644 834 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 SLC4A8Q2Y0W8 1093 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
RCL1-208ENST00000448872 DCPSQ96C86 337 aaKnown RBP14.23□□□□□ -0.13
RCL1-208ENST00000448872 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 GLIS2Q9BZE0 524 aaPredicted RBP14.23□□□□□ -0.13
RCL1-208ENST00000448872 CRNKL1Q9BZJ0 848 aaKnown RBP14.23□□□□□ -0.13
RCL1-208ENST00000448872 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
RCL1-208ENST00000448872 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
RCL1-208ENST00000448872 TMOD2Q9NZR1 351 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms