RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FAM163AQ96GL9 167 aaPredicted RBP17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 GAKO14976 1311 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 GOLIM4O00461 696 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 ERC2O15083 957 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 BTDP43251 543 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 VEGFBP49765 207 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 RASA3Q14644 834 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 PRAMEF18Q5VWM3 479 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 PAG1Q9NWQ8 432 aa17.04■□□□□ 0.32
GTF3C3-206ENST00000448539 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
GTF3C3-206ENST00000448539 CACNB3P54284 484 aa17.03■□□□□ 0.32
GTF3C3-206ENST00000448539 HAUS7Q99871 368 aa17.03■□□□□ 0.32
GTF3C3-206ENST00000448539 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
GTF3C3-206ENST00000448539 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 BAG3O95817 575 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 MX1P20591 662 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 CYP7A1P22680 504 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 SUPT20HL1Q3ZLR7 823 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 FKBP1CQ5VVH2 108 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
GTF3C3-206ENST00000448539 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.31
GTF3C3-206ENST00000448539 RASSF10A6NK89 507 aa17.01■□□□□ 0.31
GTF3C3-206ENST00000448539 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
GTF3C3-206ENST00000448539 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
GTF3C3-206ENST00000448539 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
GTF3C3-206ENST00000448539 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
GTF3C3-206ENST00000448539 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.313e-7■■□□□ 11.5
GTF3C3-206ENST00000448539 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
GTF3C3-206ENST00000448539 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
GTF3C3-206ENST00000448539 PLCG2P16885 1265 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 FKBP1BP68106 108 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 NUCB1Q02818 461 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 DEFB115Q30KQ5 88 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 FAM83AQ86UY5 434 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 OTUD7AQ8TE49 926 aaPredicted RBP17■□□□□ 0.31
GTF3C3-206ENST00000448539 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
GTF3C3-206ENST00000448539 TLL2Q9Y6L7 1015 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 ECM29Q5VYK3 1845 aa17■□□□□ 0.31
GTF3C3-206ENST00000448539 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 HUNKP57058 714 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 TCP10Q12799 353 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 SLC9C2Q5TAH2 1124 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 ARMC9Q7Z3E5 817 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 SAPCD2Q86UD0 394 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
GTF3C3-206ENST00000448539 MYH2Q9UKX2 1941 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 FOXN1O15353 648 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 PRKG1Q13976 671 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 ZSCAN25Q6NSZ9 544 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 IDI2Q9BXS1 227 aa16.98■□□□□ 0.31
GTF3C3-206ENST00000448539 ENTPD3O75355 529 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 PDE6AP16499 860 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 RGS3P49796 1198 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 RHBDL3P58872 404 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 NFIAQ12857 509 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 PICALMQ13492 652 aa16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
GTF3C3-206ENST00000448539 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 ECE1P42892 770 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 PDE1AP54750 535 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 PPP4CP60510 307 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 GRM1Q13255 1194 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 ADGRA1Q86SQ6 560 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 PI4K2BQ8TCG2 481 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 HHIPL1Q96JK4 782 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 TEPSINQ96N21 525 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 FAM198AQ9UFP1 575 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
GTF3C3-206ENST00000448539 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.3
GTF3C3-206ENST00000448539 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.3
GTF3C3-206ENST00000448539 MAST2Q6P0Q8 1798 aa16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 UBE2Q2LH0YL09 131 aa16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 DCAF15Q66K64 600 aa16.95■□□□□ 0.3
GTF3C3-206ENST00000448539 RPAP1Q9BWH6 1393 aaPredicted RBP16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 ADD2P35612 726 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms