RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 GOLGA6CA6NDK9 693 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 KIAA0754O94854 1291 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 GOLGA6DP0CG33 693 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 GPTP24298 496 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 HSP90AB3PQ58FF7 597 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 GDAP1L1Q96MZ0 367 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 GOLGA6AQ9NYA3 693 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 MARCKSP29966 332 aaPredicted RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 GGCXP38435 758 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 RAD9BQ6WBX8 426 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 DHX32Q7L7V1 743 aaKnown RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CAPS2Q9BXY5 557 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 SAMM50Q9Y512 469 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 PI4KAP2A4QPH2 592 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 MYO1FO00160 1098 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 C21orf2O43822 256 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 NF2P35240 595 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 PI4KAP1Q8N8J0 262 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 MIEF2Q96C03 454 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 EHD4Q9H223 541 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 ABCC6O95255 1503 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CARMIL3Q8ND23 1372 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 MAP3K19Q56UN5 1328 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CALRP27797 417 aaKnown RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 N4BP2L2Q92802 583 aaPredicted RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 C9orf78Q9NZ63 289 aaPredicted RBP10.72□□□□□ -0.69
SYNPO2-204ENST00000448416 CACNA1FO60840 1977 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 GOLIM4O00461 696 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 CHUKO15111 745 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 MCM3P25205 808 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 PPFIA1Q13136 1202 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 COG1Q8WTW3 980 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 EDC3Q96F86 508 aaKnown RBP10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 C8orf76Q96K31 380 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 CD248Q9HCU0 757 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 ITSN1Q15811 1721 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 PIK3C2BO00750 1634 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 GNGT1P63211 74 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 DDR1Q08345 913 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 NCAPH2Q6IBW4 605 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 HOOK1Q9UJC3 728 aaKnown RBP10.71□□□□□ -0.69
SYNPO2-204ENST00000448416 CCDC129Q6ZRS4 1044 aa10.71□□□□□ -0.7
SYNPO2-204ENST00000448416 NFE2L3Q9Y4A8 694 aa10.71□□□□□ -0.7
SYNPO2-204ENST00000448416 CPS1P31327 1500 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 NEBLO76041 1014 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 PANX2Q96RD6 677 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 MYO6Q9UM54 1294 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 IBSPP21815 317 aaPredicted RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 PDE4BQ07343 736 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 TEFQ10587 303 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 KIDINS220Q9ULH0 1771 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 EIF3HO15372 352 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 NUDT16Q96DE0 195 aaKnown RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 ODF2LQ9ULJ1 636 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 JCADQ9P266 1359 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 SASH1O94885 1247 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 STOX1Q6ZVD7 989 aa10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 NAA15Q9BXJ9 866 aaKnown RBP10.7□□□□□ -0.7
SYNPO2-204ENST00000448416 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 PDIA3P30101 505 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 USP14P54578 494 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 TTC19Q6DKK2 380 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 BRAPQ7Z569 592 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 MCM8Q9UJA3 840 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 NDUFAB1O14561 156 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 GOLGA6BA6NDN3 693 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 CDC27P30260 824 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 CENPHQ9H3R5 247 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
SYNPO2-204ENST00000448416 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 FNTAP49354 379 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 CCDC102BQ68D86 513 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 CHST3Q7LGC8 479 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
SYNPO2-204ENST00000448416 TRMT44Q8IYL2 757 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms