RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ZBTB22O15209 634 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 GJA5P36382 358 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 MAP3K9P80192 1104 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 POLA2Q14181 598 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 DZIP1Q86YF9 867 aaKnown RBP21.84■■□□□ 1.09
DDX56-207ENST00000448192 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 OPTNQ96CV9 577 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 HOOK2Q96ED9 719 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 USP40Q9NVE5 1235 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 CSADQ9Y600 493 aa21.84■■□□□ 1.09
DDX56-207ENST00000448192 PDS5AQ29RF7 1337 aaKnown RBP21.83■■□□□ 1.09
DDX56-207ENST00000448192 TCP10Q12799 353 aa21.83■■□□□ 1.09
DDX56-207ENST00000448192 VGLL4Q14135 290 aa21.83■■□□□ 1.09
DDX56-207ENST00000448192 SPTY2D1Q68D10 685 aaPredicted RBP21.83■■□□□ 1.09
DDX56-207ENST00000448192 IFNL1Q8IU54 200 aa21.83■■□□□ 1.09
DDX56-207ENST00000448192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.83■■□□□ 1.09
DDX56-207ENST00000448192 ZNF296Q8WUU4 475 aaPredicted RBP21.83■■□□□ 1.09
DDX56-207ENST00000448192 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
DDX56-207ENST00000448192 ALDH1A1P00352 501 aa21.82■■□□□ 1.08
DDX56-207ENST00000448192 FAM151AQ8WW52 585 aa21.82■■□□□ 1.08
DDX56-207ENST00000448192 GPR25O00155 361 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 NFIAQ12857 509 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 CTU1Q7Z7A3 348 aaKnown RBP21.81■■□□□ 1.08
DDX56-207ENST00000448192 CNKSR2Q8WXI2 1034 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 WRNIP1Q96S55 665 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 R3HDMLQ9H3Y0 253 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 HMG20BQ9P0W2 317 aa21.81■■□□□ 1.08
DDX56-207ENST00000448192 RPAP1Q9BWH6 1393 aaPredicted RBP21.81■■□□□ 1.08
DDX56-207ENST00000448192 IGF2BP3O00425 579 aaKnown RBP eCLIP21.8■■□□□ 1.08
DDX56-207ENST00000448192 DCAF15Q66K64 600 aa21.8■■□□□ 1.08
DDX56-207ENST00000448192 PI16Q6UXB8 463 aa21.8■■□□□ 1.08
DDX56-207ENST00000448192 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
DDX56-207ENST00000448192 SLF2Q8IX21 1173 aa21.8■■□□□ 1.08
DDX56-207ENST00000448192 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
DDX56-207ENST00000448192 OTUD7BQ6GQQ9 843 aa21.79■■□□□ 1.08
DDX56-207ENST00000448192 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
DDX56-207ENST00000448192 OTUD5Q96G74 571 aa21.79■■□□□ 1.08
DDX56-207ENST00000448192 CFHR5Q9BXR6 569 aa21.79■■□□□ 1.08
DDX56-207ENST00000448192 FAM198AQ9UFP1 575 aa21.79■■□□□ 1.08
DDX56-207ENST00000448192 GAKO14976 1311 aa21.79■■□□□ 1.08
DDX56-207ENST00000448192 FKTNO75072 461 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 UQCRFS1P1P0C7P4 283 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 MS4A1P11836 297 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 ARID4AP29374 1257 aaPredicted RBP21.78■■□□□ 1.08
DDX56-207ENST00000448192 MECOMQ03112 1051 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 TNNI3KQ59H18 835 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 NOM1Q5C9Z4 860 aaKnown RBP21.78■■□□□ 1.08
DDX56-207ENST00000448192 TBC1D9Q6ZT07 1266 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 ZNF341Q9BYN7 854 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 GPR108Q9NPR9 543 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 FPGT-TNNI3KV9GXZ4 949 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
DDX56-207ENST00000448192 MCAMP43121 646 aa21.77■■□□□ 1.08
DDX56-207ENST00000448192 TTC39AQ5SRH9 613 aa21.77■■□□□ 1.08
DDX56-207ENST00000448192 ZFPM1Q8IX07 1006 aa21.77■■□□□ 1.08
DDX56-207ENST00000448192 SNCAIPQ9Y6H5 919 aa21.77■■□□□ 1.08
DDX56-207ENST00000448192 MROH7-TTC4A0A0A0MT08 1334 aa21.77■■□□□ 1.07
DDX56-207ENST00000448192 TESPA1A2RU30 521 aaPredicted RBP21.76■■□□□ 1.07
DDX56-207ENST00000448192 BTDP43251 543 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 RGS3P49796 1198 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 CEP85Q6P2H3 762 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 FAM163AQ96GL9 167 aaPredicted RBP21.76■■□□□ 1.07
DDX56-207ENST00000448192 MS4A4AQ96JQ5 239 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 PTPN18Q99952 460 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 DBNDD2Q9BQY9 259 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 RAI14Q9P0K7 980 aa21.76■■□□□ 1.07
DDX56-207ENST00000448192 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
DDX56-207ENST00000448192 CCL15-CCL14A0A0B4J2E2 113 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 SPDYE5A6NIY4 337 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 GTF2A2P52657 109 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 CCL15Q16663 113 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 ERO1BQ86YB8 467 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 SNRKQ9NRH2 765 aa21.75■■□□□ 1.07
DDX56-207ENST00000448192 INPP5BP32019 993 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 GSTO1P78417 241 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 CRHR2Q13324 411 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 ZSCAN29Q8IWY8 852 aaPredicted RBP21.74■■□□□ 1.07
DDX56-207ENST00000448192 ZNF384Q8TF68 577 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 BRI3BPQ8WY22 251 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 IDI2Q9BXS1 227 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 LRP2BPQ9P2M1 347 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
DDX56-207ENST00000448192 ENTPD3O75355 529 aa21.73■■□□□ 1.07
DDX56-207ENST00000448192 LDHCP07864 332 aa21.73■■□□□ 1.07
DDX56-207ENST00000448192 PICALMQ13492 652 aa21.73■■□□□ 1.07
DDX56-207ENST00000448192 NSUN4Q96CB9 384 aaKnown RBP21.73■■□□□ 1.07
DDX56-207ENST00000448192 MYO5AQ9Y4I1 1855 aaKnown RBP21.73■■□□□ 1.07
DDX56-207ENST00000448192 GPR75-ASB3A0A0A6YYF3 556 aa21.72■■□□□ 1.07
DDX56-207ENST00000448192 WDHD1O75717 1129 aaPredicted RBP21.72■■□□□ 1.07
DDX56-207ENST00000448192 PKN2Q16513 984 aaKnown RBP21.72■■□□□ 1.07
DDX56-207ENST00000448192 CCDC8Q9H0W5 538 aaPredicted RBP21.72■■□□□ 1.07
DDX56-207ENST00000448192 ZNF112Q9UJU3 913 aa21.72■■□□□ 1.07
DDX56-207ENST00000448192 EXOC6BQ9Y2D4 811 aa21.72■■□□□ 1.07
DDX56-207ENST00000448192 COG6Q9Y2V7 657 aa21.72■■□□□ 1.07
DDX56-207ENST00000448192 IRF6O14896 467 aa21.71■■□□□ 1.07
DDX56-207ENST00000448192 PPIL2Q13356 520 aa21.71■■□□□ 1.07
DDX56-207ENST00000448192 DDX4Q9NQI0 724 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms