RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 FAM151AQ8WW52 585 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 TEPSINQ96N21 525 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 WRNIP1Q96S55 665 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
NPIPB3-202ENST00000448012 GPR25O00155 361 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 ZBTB22O15209 634 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 LDHCP07864 332 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 GTF2A2P52657 109 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 ZNF296Q8WUU4 475 aaPredicted RBP13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 SSC5DA1L4H1 1573 aa13.49□□□□□ -0.25
NPIPB3-202ENST00000448012 RPAP1Q9BWH6 1393 aaPredicted RBP13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 TCP10Q12799 353 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 VGLL4Q14135 290 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 CHMP4BQ9H444 224 aaKnown RBP13.48□□□□□ -0.25
NPIPB3-202ENST00000448012 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 SPATA5Q8NB90 893 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 CFHR5Q9BXR6 569 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
NPIPB3-202ENST00000448012 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 CCL15-CCL14A0A0B4J2E2 113 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 CETPP11597 493 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 CCL15Q16663 113 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 HSP90AB4PQ58FF6 505 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 MIGA2Q7L4E1 593 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 SSH3Q8TE77 659 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 C1orf115Q9H7X2 142 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
NPIPB3-202ENST00000448012 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 ENTPD3O75355 529 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 SNAPC2Q13487 334 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 POLA2Q14181 598 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 ERO1AQ96HE7 468 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 ZFYVE28Q9HCC9 887 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
NPIPB3-202ENST00000448012 MROH7-TTC4A0A0A0MT08 1334 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 GAKO14976 1311 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 HMMRO75330 724 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 GJA5P36382 358 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 BTDP43251 543 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 RGS3P49796 1198 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 MECOMQ03112 1051 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 PICALMQ13492 652 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
NPIPB3-202ENST00000448012 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 BAG3O95817 575 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 RLBP1P12271 317 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 PPATQ06203 517 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 NFIAQ12857 509 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 CRHR2Q13324 411 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 PPIL2Q13356 520 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 FBXO46Q6PJ61 603 aaPredicted RBP13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 TRIM17Q9Y577 477 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
NPIPB3-202ENST00000448012 IGSF3O75054 1194 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 PLCG2P16885 1265 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 SP3Q02447 781 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 KIF22Q14807 665 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms