RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 RNF40O75150 1001 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 CDC27P30260 824 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 LIG3P49916 1009 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 TADA2BQ86TJ2 420 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
CNOT3-204ENST00000447684 GDAP1L1Q96MZ0 367 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 CLIC6Q96NY7 704 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 ACBD3Q9H3P7 528 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 NFE2L3Q9Y4A8 694 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 MRC1P22897 1456 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 SLIT1O75093 1534 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-204ENST00000447684 EFCAB13Q8IY85 973 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 STK11IPQ8N1F8 1099 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
CNOT3-204ENST00000447684 NLRP6P59044 892 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
CNOT3-204ENST00000447684 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 PRR29P0C7W0 189 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 CHRM1P11229 460 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-204ENST00000447684 MNAT1P51948 309 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 TFCP2Q12800 502 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 MMS22LQ6ZRQ5 1243 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 RAB21Q9UL25 225 aa18.31■□□□□ 0.52
CNOT3-204ENST00000447684 CTAGE15A4D2H0 777 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CTAGE9A4FU28 777 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 FOXN1O15353 648 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CTAGE8P0CG41 777 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 USP5P45974 858 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 HAND2P61296 217 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
CNOT3-204ENST00000447684 TBX2Q13207 712 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-204ENST00000447684 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CTAGE6Q86UF2 777 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CTAGE4Q8IX94 777 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 MARF1Q9Y4F3 1742 aaKnown RBP18.3■□□□□ 0.52
CNOT3-204ENST00000447684 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CCDC91Q7Z6B0 441 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
CNOT3-204ENST00000447684 UTYO14607 1347 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 ATP5JP18859 108 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 LONRF3Q496Y0 759 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 SLC35F6Q8N357 371 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 MSANTD4Q8NCY6 345 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-204ENST00000447684 GBP3Q9H0R5 595 aa18.3■□□□□ 0.52
CNOT3-204ENST00000447684 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 LAMA4Q16363 1823 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 GOLIM4O00461 696 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 SHC4Q6S5L8 630 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 RIN2Q8WYP3 895 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 KLF18A0A0U1RQI7 1052 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 AKR1B15C9JRZ8 316 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 RAD9BQ6WBX8 426 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 FOXP4Q8IVH2 680 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 NOA1Q8NC60 698 aaKnown RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNOT3-204ENST00000447684 RAI14Q9P0K7 980 aa18.29■□□□□ 0.52
CNOT3-204ENST00000447684 ERLIN2O94905 339 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 CCDC102BQ68D86 513 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 AIFM3Q96NN9 605 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 ADGRG1Q9Y653 693 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 RGPD8O14715 1765 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-204ENST00000447684 A0A087WUV0 522 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-204ENST00000447684 FMR1Q06787 632 aaKnown RBP eCLIP18.28■□□□□ 0.52
CNOT3-204ENST00000447684 PPFIBP1Q86W92 1011 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
CNOT3-204ENST00000447684 BMP6P22004 513 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 CCT5P48643 541 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 KIF23Q02241 960 aaPredicted RBP18.27■□□□□ 0.52
CNOT3-204ENST00000447684 SLC39A14Q15043 492 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 EP400NLQ6ZTU2 488 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 NEUROD6Q96NK8 337 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 MED4Q9NPJ6 270 aa18.27■□□□□ 0.52
CNOT3-204ENST00000447684 SAMSN1Q9NSI8 373 aaKnown RBP18.27■□□□□ 0.52
CNOT3-204ENST00000447684 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
CNOT3-204ENST00000447684 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
CNOT3-204ENST00000447684 HOOK1Q9UJC3 728 aaKnown RBP18.26■□□□□ 0.51
CNOT3-204ENST00000447684 USP54Q70EL1 1684 aa18.26■□□□□ 0.51
CNOT3-204ENST00000447684 CT47A1Q5JQC4 288 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms