RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
HMGA1-205ENST00000447654 KCNV1Q6PIU1 500 aa21.96■■□□□ 1.11
HMGA1-205ENST00000447654 ILDR2Q71H61 639 aa21.96■■□□□ 1.11
HMGA1-205ENST00000447654 PRPF38AQ8NAV1 312 aaKnown RBP21.96■■□□□ 1.11
HMGA1-205ENST00000447654 KAZALD1Q96I82 304 aa21.96■■□□□ 1.11
HMGA1-205ENST00000447654 ZNF396Q96N95 335 aaPredicted RBP21.96■■□□□ 1.11
HMGA1-205ENST00000447654 WDR24Q96S15 920 aa21.96■■□□□ 1.11
HMGA1-205ENST00000447654 GOLPH3LQ9H4A5 285 aa21.96■■□□□ 1.11
HMGA1-205ENST00000447654 MYL6BP14649 208 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 FANCCQ00597 558 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 JMYQ8N9B5 988 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 GOLIM4O00461 696 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 EBAG9O00559 213 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 STX10O60499 249 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 IFIT2P09913 472 aaKnown RBP21.95■■□□□ 1.1
HMGA1-205ENST00000447654 NAA16Q6N069 864 aaPredicted RBP21.95■■□□□ 1.1
HMGA1-205ENST00000447654 CCDC102AQ96A19 550 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 KIAA1468Q9P260 1216 aa21.95■■□□□ 1.1
HMGA1-205ENST00000447654 N4BP1O75113 896 aaKnown RBP21.94■■□□□ 1.1
HMGA1-205ENST00000447654 ADD1P35611 737 aaKnown RBP21.94■■□□□ 1.1
HMGA1-205ENST00000447654 DHX58Q96C10 678 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 SLAIN2Q9P270 581 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 GLRX3O76003 335 aaKnown RBP21.94■■□□□ 1.1
HMGA1-205ENST00000447654 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 NLRP12P59046 1061 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 NCAPHQ15003 741 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 CREB3L3Q68CJ9 461 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 CABS1Q96KC9 395 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 ABCB6Q9NP58 842 aa21.94■■□□□ 1.1
HMGA1-205ENST00000447654 A0A1W2PQ27 194 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 A0A1W2PQ64 194 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 A0A1W2PQD8 194 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 H3BQV1 296 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 MAP4K4O95819 1239 aaPredicted RBP21.93■■□□□ 1.1
HMGA1-205ENST00000447654 PTH1RQ03431 593 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 IFFO2Q5TF58 517 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 BLOC1S2Q6QNY1 142 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 LRP10Q7Z4F1 713 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 TMEM139Q8IV31 216 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 VSTM4Q8IW00 320 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 MIEF2Q96C03 454 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 C9orf78Q9NZ63 289 aaPredicted RBP21.93■■□□□ 1.1
HMGA1-205ENST00000447654 CDC23Q9UJX2 597 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 PA2G4Q9UQ80 394 aaKnown RBP21.93■■□□□ 1.1
HMGA1-205ENST00000447654 PKD1L3Q7Z443 1732 aa21.93■■□□□ 1.1
HMGA1-205ENST00000447654 ALDH1L1O75891 902 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 GPTP24298 496 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 FMR1NBQ8N0W7 255 aaPredicted RBP21.92■■□□□ 1.1
HMGA1-205ENST00000447654 DCAF5Q96JK2 942 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 SNRKQ9NRH2 765 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 RPS6KB1P23443 525 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 MAP9Q49MG5 647 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.92■■□□□ 1.1
HMGA1-205ENST00000447654 FAM169AQ9Y6X4 670 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 ABCC6O95255 1503 aa21.92■■□□□ 1.1
HMGA1-205ENST00000447654 SOS2Q07890 1332 aaPredicted RBP21.91■■□□□ 1.1
HMGA1-205ENST00000447654 HIP1O00291 1037 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 ELF1P32519 619 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 IRX1P78414 480 aaPredicted RBP21.91■■□□□ 1.1
HMGA1-205ENST00000447654 MTX1Q13505 466 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 SPATS2Q86XZ4 545 aaKnown RBP21.91■■□□□ 1.1
HMGA1-205ENST00000447654 FSIP1Q8NA03 581 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 MRPS27Q92552 414 aaKnown RBP21.91■■□□□ 1.1
HMGA1-205ENST00000447654 MAP4K1Q92918 833 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 BRF1Q92994 677 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 SUCLG2Q96I99 432 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 MRC1P22897 1456 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 FMNL3Q8IVF7 1028 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 XAGE3Q8WTP9 111 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 PRDM11Q9NQV5 511 aa21.91■■□□□ 1.1
HMGA1-205ENST00000447654 RNF40O75150 1001 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 PRPF6O94906 941 aaKnown RBP21.9■■□□□ 1.1
HMGA1-205ENST00000447654 MCM3P25205 808 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 INPP5BP32019 993 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 LIG3P49916 1009 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 DPCR1Q3MIW9 517 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 WDR93Q6P2C0 686 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 COPS6Q7L5N1 327 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 AMOTL1Q8IY63 956 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 SDF4Q9BRK5 362 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
HMGA1-205ENST00000447654 MCM8Q9UJA3 840 aa21.9■■□□□ 1.1
HMGA1-205ENST00000447654 A6NNZ2 444 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 ANKRD65E5RJM6 399 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 CHUKO15111 745 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.1
HMGA1-205ENST00000447654 TOP1P11387 765 aaKnown RBP21.89■■□□□ 1.1
HMGA1-205ENST00000447654 KIF4BQ2VIQ3 1234 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 TUBB8Q3ZCM7 444 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 HMG20BQ9P0W2 317 aa21.89■■□□□ 1.1
HMGA1-205ENST00000447654 RBM8AQ9Y5S9 174 aaKnown RBP21.89■■□□□ 1.1
HMGA1-205ENST00000447654 GRM8O00222 908 aa21.89■■□□□ 1.09
HMGA1-205ENST00000447654 UBASH3AP57075 661 aa21.89■■□□□ 1.09
HMGA1-205ENST00000447654 CCDC12Q8WUD4 166 aaPredicted RBP21.89■■□□□ 1.09
HMGA1-205ENST00000447654 PNKPQ96T60 521 aa21.89■■□□□ 1.09
HMGA1-205ENST00000447654 BAG1Q99933 345 aaPredicted RBP21.89■■□□□ 1.09
HMGA1-205ENST00000447654 SGSM3Q96HU1 749 aa21.88■■□□□ 1.09
HMGA1-205ENST00000447654 VEZTQ9HBM0 779 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms