RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 BOLA2Q9H3K6 86 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
RFC4-208ENST00000447345 FZD1Q9UP38 647 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 TLL2Q9Y6L7 1015 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 MYH1P12882 1939 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 THSD7BQ9C0I4 1608 aa14.52□□□□□ -0.08
RFC4-208ENST00000447345 GOLIM4O00461 696 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 IGHDP01880 384 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 NF2P35240 595 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 TNNI2P48788 182 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 HUNKP57058 714 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 GSTO1P78417 241 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 ANKRD45Q5TZF3 282 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 B4GALNT3Q6L9W6 998 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.09
RFC4-208ENST00000447345 SAPCD2Q86UD0 394 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 DNAJC5GQ8N7S2 189 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 OTUD7AQ8TE49 926 aaPredicted RBP14.52□□□□□ -0.09
RFC4-208ENST00000447345 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 GPATCH3Q96I76 525 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 MRIQ9BWK5 157 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.09
RFC4-208ENST00000447345 USP40Q9NVE5 1235 aa14.52□□□□□ -0.09
RFC4-208ENST00000447345 RASSF10A6NK89 507 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 TCP10Q12799 353 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 NFIAQ12857 509 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 DEFB115Q30KQ5 88 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 NBPF12Q5TAG4 269 aaPredicted RBP14.51□□□□□ -0.09
RFC4-208ENST00000447345 CYP4F22Q6NT55 531 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 ADGRA1Q86SQ6 560 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 GCC1Q96CN9 775 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 ECHDC1Q9NTX5 307 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.51□□□□□ -0.09
RFC4-208ENST00000447345 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
RFC4-208ENST00000447345 LDHCP07864 332 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 ATP5JP18859 108 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 PICALMQ13492 652 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.5□□□□□ -0.09
RFC4-208ENST00000447345 NOL10Q9BSC4 688 aaKnown RBP14.5□□□□□ -0.09
RFC4-208ENST00000447345 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
RFC4-208ENST00000447345 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
RFC4-208ENST00000447345 RFX7Q2KHR2 1363 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 GPR75-ASB3A0A0A6YYF3 556 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 CYP7A1P22680 504 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 VEGFBP49765 207 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 TTF1Q15361 905 aaPredicted RBP14.49□□□□□ -0.09
RFC4-208ENST00000447345 HAUS7Q99871 368 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 LNPKQ9C0E8 428 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 PAG1Q9NWQ8 432 aa14.49□□□□□ -0.09
RFC4-208ENST00000447345 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
RFC4-208ENST00000447345 BAZ2AQ9UIF9 1905 aaKnown RBP14.49□□□□□ -0.09
RFC4-208ENST00000447345 UBE2Q2LH0YL09 131 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 MAP4K4O95819 1239 aaPredicted RBP14.48□□□□□ -0.09
RFC4-208ENST00000447345 RGS3P49796 1198 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 MAP3K12Q12852 859 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 SUPT20HL1Q3ZLR7 823 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 FAM83AQ86UY5 434 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 SMC5Q8IY18 1101 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 MIGA1Q8NAN2 632 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 SH3RF3Q8TEJ3 882 aaPredicted RBP14.48□□□□□ -0.09
RFC4-208ENST00000447345 FAM163AQ96GL9 167 aaPredicted RBP14.48□□□□□ -0.09
RFC4-208ENST00000447345 CAPNS2Q96L46 248 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 TEPSINQ96N21 525 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 FAM198AQ9UFP1 575 aa14.48□□□□□ -0.09
RFC4-208ENST00000447345 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
RFC4-208ENST00000447345 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
RFC4-208ENST00000447345 WDR33Q9C0J8 1336 aaKnown RBP14.47□□□□□ -0.09
RFC4-208ENST00000447345 MYH8P13535 1937 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 WDHD1O75717 1129 aaPredicted RBP14.47□□□□□ -0.09
RFC4-208ENST00000447345 MX1P20591 662 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 RHBDL3P58872 404 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
RFC4-208ENST00000447345 FKBP1BP68106 108 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 ZFPM1Q8IX07 1006 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 TEX11Q8IYF3 940 aa14.47□□□□□ -0.09
RFC4-208ENST00000447345 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
RFC4-208ENST00000447345 DOCK1Q14185 1865 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 AOC2O75106 756 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 BAG3O95817 575 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 PDE6AP16499 860 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 ECE1P42892 770 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 ZNF157P51786 506 aaPredicted RBP14.46□□□□□ -0.09
RFC4-208ENST00000447345 SLFNL1Q499Z3 407 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 SLC9C2Q5TAH2 1124 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 RGMBQ6NW40 437 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 ARMC9Q7Z3E5 817 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 FAM151AQ8WW52 585 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 LAMB1P07942 1786 aa14.46□□□□□ -0.09
RFC4-208ENST00000447345 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 SALL3Q9BXA9 1300 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 ZNF532Q9HCE3 1301 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 PCNTO95613 3336 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
RFC4-208ENST00000447345 CHGBP05060 677 aa14.45□□□□□ -0.1
RFC4-208ENST00000447345 ZSCAN29Q8IWY8 852 aaPredicted RBP14.45□□□□□ -0.1
RFC4-208ENST00000447345 PI4K2BQ8TCG2 481 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms