RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 PRMT2P55345 433 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 CCL15Q16663 113 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 LARP6Q9BRS8 491 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 STK31Q9BXU1 1019 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 ZNF70Q9UC06 446 aaPredicted RBP12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 FAM205AQ6ZU69 1335 aa12.61□□□□□ -0.39
UBE2D4-206ENST00000446008 TLR2O60603 784 aa12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 G2E3Q7L622 706 aa12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
UBE2D4-206ENST00000446008 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 LACTBP83111 547 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 VGLL4Q14135 290 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 KIF22Q14807 665 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 SH3TC2Q8TF17 1288 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 ZSWIM8A7E2V4 1837 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 COL6A3P12111 3177 aa12.59□□□□□ -0.39
UBE2D4-206ENST00000446008 A0A0C4DFX4 3053 aa12.58□□□□□ -0.39
UBE2D4-206ENST00000446008 TNNI2P48788 182 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 FOXO4P98177 505 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 CSADQ9Y600 493 aa12.58□□□□□ -0.4
UBE2D4-206ENST00000446008 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 CETPP11597 493 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 TMEM39BQ9GZU3 492 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 JAG2Q9Y219 1238 aa12.57□□□□□ -0.4
UBE2D4-206ENST00000446008 TCP10L2B9ZVM9 353 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 BTBD19C9JJ37 291 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 FLIIQ13045 1269 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 C17orf99Q6UX52 265 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 UBE2Q1Q7Z7E8 422 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 DPF3Q92784 378 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
UBE2D4-206ENST00000446008 SNAPC2Q13487 334 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 MTFR1Q15390 333 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 SNCAIPQ9Y6H5 919 aa12.55□□□□□ -0.4
UBE2D4-206ENST00000446008 DLL1O00548 723 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 IRF6O14896 467 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 GJB1P08034 283 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 HIBADHP31937 336 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 CRKP46108 304 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 GJA8P48165 433 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 PPIL2Q13356 520 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 FKBP5Q13451 457 aaPredicted RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 MFSD10Q14728 455 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 FAM84BQ96KN1 310 aaPredicted RBP12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 HTATIP2Q9BUP3 242 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
UBE2D4-206ENST00000446008 POTEMA6NI47 508 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 PLIN1O60240 522 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 HOXD10P28358 340 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 CTGFP29279 349 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 GRK4P32298 578 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 PPATQ06203 517 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 SLC17A8Q8NDX2 589 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 MRIQ9BWK5 157 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 CHMP3Q9Y3E7 222 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
UBE2D4-206ENST00000446008 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms