RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
GARNL3-208ENST00000444677 KIF1BPQ96EK5 621 aa16.6■□□□□ 0.25
GARNL3-208ENST00000444677 PIH1D3Q9NQM4 214 aaKnown RBP16.6■□□□□ 0.25
GARNL3-208ENST00000444677 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
GARNL3-208ENST00000444677 RAI14Q9P0K7 980 aa16.6■□□□□ 0.25
GARNL3-208ENST00000444677 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
GARNL3-208ENST00000444677 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-208ENST00000444677 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
GARNL3-208ENST00000444677 RASAL3Q86YV0 1011 aa16.59■□□□□ 0.25
GARNL3-208ENST00000444677 ZFPM1Q8IX07 1006 aa16.59■□□□□ 0.25
GARNL3-208ENST00000444677 NSUN4Q96CB9 384 aaKnown RBP16.59■□□□□ 0.25
GARNL3-208ENST00000444677 ZNF512BQ96KM6 892 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-208ENST00000444677 SLC10A3P09131 477 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-208ENST00000444677 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 CLASRPQ8N2M8 674 aaKnown RBP16.58■□□□□ 0.24
GARNL3-208ENST00000444677 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 GAKO14976 1311 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.24
GARNL3-208ENST00000444677 MROH7-TTC4A0A0A0MT08 1334 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 MAP2K2P36507 400 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 BTDP43251 543 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 TNNI2P48788 182 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 TCP10Q12799 353 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
GARNL3-208ENST00000444677 CCDC102AQ96A19 550 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
GARNL3-208ENST00000444677 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 LRP2BPQ9P2M1 347 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
GARNL3-208ENST00000444677 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 CAPN15O75808 1086 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
GARNL3-208ENST00000444677 CTCFP49711 727 aaPredicted RBP16.56■□□□□ 0.24
GARNL3-208ENST00000444677 NOGQ13253 232 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 FKBP1CQ5VVH2 108 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
GARNL3-208ENST00000444677 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
GARNL3-208ENST00000444677 GPR75-ASB3A0A0A6YYF3 556 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-208ENST00000444677 RHBDL3P58872 404 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-208ENST00000444677 FAM83AQ86UY5 434 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 FAM151AQ8WW52 585 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
GARNL3-208ENST00000444677 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
GARNL3-208ENST00000444677 WDHD1O75717 1129 aaPredicted RBP16.54■□□□□ 0.24
GARNL3-208ENST00000444677 SLURP2P0DP57 97 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 RGS3P49796 1198 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 LBX1P52954 281 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
GARNL3-208ENST00000444677 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
GARNL3-208ENST00000444677 LDHCP07864 332 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
GARNL3-208ENST00000444677 GSTO1P78417 241 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 PICALMQ13492 652 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
GARNL3-208ENST00000444677 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 EXOC6Q8TAG9 804 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
GARNL3-208ENST00000444677 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
GARNL3-208ENST00000444677 GJA5P36382 358 aa16.52■□□□□ 0.24
GARNL3-208ENST00000444677 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
GARNL3-208ENST00000444677 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.52■□□□□ 0.24
GARNL3-208ENST00000444677 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
GARNL3-208ENST00000444677 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
GARNL3-208ENST00000444677 DYNLL1P63167 89 aaKnown RBP16.51■□□□□ 0.23
GARNL3-208ENST00000444677 SPRYD7Q5W111 196 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 SH3RF3Q8TEJ3 882 aaPredicted RBP16.51■□□□□ 0.23
GARNL3-208ENST00000444677 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
GARNL3-208ENST00000444677 ELP3Q9H9T3 547 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.23
GARNL3-208ENST00000444677 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
GARNL3-208ENST00000444677 GOLIM4O00461 696 aa16.5■□□□□ 0.23
GARNL3-208ENST00000444677 CYP7A1P22680 504 aa16.5■□□□□ 0.23
GARNL3-208ENST00000444677 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
GARNL3-208ENST00000444677 ANKRD13AQ8IZ07 590 aa16.5■□□□□ 0.23
GARNL3-208ENST00000444677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.23
GARNL3-208ENST00000444677 ENTPD3O75355 529 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 ATP5JP18859 108 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-208ENST00000444677 VGLL4Q14135 290 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 TEX11Q8IYF3 940 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms