RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 SASH3O75995 380 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 ATL3Q6DD88 541 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 PUS7LQ9H0K6 701 aaKnown RBP16.28■□□□□ 0.2
MCF2L-218ENST00000442625 HPS5Q9UPZ3 1129 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 FOXN1O15353 648 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-218ENST00000442625 WDR24Q96S15 920 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 CPLX1O14810 134 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 CAPN2P17655 700 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 CYP2C19P33261 490 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 ANTXR2P58335 489 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 TMCO3Q6UWJ1 677 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 PDILTQ8N807 584 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
MCF2L-218ENST00000442625 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.19
MCF2L-218ENST00000442625 CDC27P30260 824 aa16.27■□□□□ 0.19
MCF2L-218ENST00000442625 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.19
MCF2L-218ENST00000442625 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.19
MCF2L-218ENST00000442625 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.19
MCF2L-218ENST00000442625 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.19
MCF2L-218ENST00000442625 ABCC6O95255 1503 aa16.27■□□□□ 0.19
MCF2L-218ENST00000442625 ZAP70P43403 619 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 EVCP57679 992 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
MCF2L-218ENST00000442625 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 TADA3O75528 432 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 PDE4BQ07343 736 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
MCF2L-218ENST00000442625 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 SYKP43405 635 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 TPM4P67936 248 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 KIF23Q02241 960 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 PHKBQ93100 1093 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 DESI2Q9BSY9 194 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 IRX2Q9BZI1 471 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 INTS13Q9NVM9 706 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 MB21D2Q8IYB1 491 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 BPIFA3Q9BQP9 254 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 SENP2Q9HC62 589 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 TOGARAM2Q6ZUX3 1019 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
MCF2L-218ENST00000442625 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
MCF2L-218ENST00000442625 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 YEATS4O95619 227 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 GNG11P61952 73 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
MCF2L-218ENST00000442625 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 CCDC57Q2TAC2 916 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 A0A0U1RQJ8 604 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 NRDCO43847 1150 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
MCF2L-218ENST00000442625 LONRF3Q496Y0 759 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 ATRIPQ8WXE1 791 aa16.24■□□□□ 0.19
MCF2L-218ENST00000442625 BMP6P22004 513 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 CMA1P23946 247 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
MCF2L-218ENST00000442625 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 MYL10Q9BUA6 226 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 PPP2R2CQ9Y2T4 447 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 ZNF213O14771 459 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 GPAA1O43292 621 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 OAS2P29728 719 aaKnown RBP16.23■□□□□ 0.19
MCF2L-218ENST00000442625 PHLPP2Q6ZVD8 1323 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 SYNE4Q8N205 404 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 CCDC191Q8NCU4 936 aa16.23■□□□□ 0.19
MCF2L-218ENST00000442625 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
MCF2L-218ENST00000442625 MYL5Q02045 173 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 MTF1Q14872 753 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 METTL16Q86W50 562 aaKnown RBP16.22■□□□□ 0.19
MCF2L-218ENST00000442625 TMEM139Q8IV31 216 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 CALCOCO1Q9P1Z2 691 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
MCF2L-218ENST00000442625 VSTM4Q8IW00 320 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
MCF2L-218ENST00000442625 CIAO1O76071 339 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms