RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZNF341Q9BYN7 854 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 DAGLAQ9Y4D2 1042 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 SALL1Q9NSC2 1324 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 CETPP11597 493 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 PRDX5P30044 214 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 PHKA1P46020 1223 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 MVPQ14764 893 aaKnown RBP14.58□□□□□ -0.08
TTC28-203ENST00000442232 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 SPTY2D1Q68D10 685 aaPredicted RBP14.58□□□□□ -0.08
TTC28-203ENST00000442232 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 DZIP1Q86YF9 867 aaKnown RBP14.58□□□□□ -0.08
TTC28-203ENST00000442232 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 PDE4DIPQ5VU43 2346 aa14.58□□□□□ -0.08
TTC28-203ENST00000442232 GNAI2P04899 355 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 SP3Q02447 781 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 TCP10Q12799 353 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 SNAPC2Q13487 334 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 GORABQ5T7V8 394 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 BRI3BPQ8WY22 251 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 USP40Q9NVE5 1235 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 ABCF2Q9UG63 623 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
TTC28-203ENST00000442232 TRIM27P14373 513 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 ADORA1P30542 326 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 PPIL2Q13356 520 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 ZKSCAN4Q969J2 545 aaPredicted RBP14.56□□□□□ -0.08
TTC28-203ENST00000442232 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 PTPN18Q99952 460 aa14.56□□□□□ -0.08
TTC28-203ENST00000442232 PDS5AQ29RF7 1337 aaKnown RBP14.56□□□□□ -0.08
TTC28-203ENST00000442232 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
TTC28-203ENST00000442232 TFCP2Q12800 502 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 G3BP1Q13283 466 aaKnown RBP eCLIP14.55□□□□□ -0.08
TTC28-203ENST00000442232 MTX1Q13505 466 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 RASGRF1Q13972 1273 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 MIGA2Q7L4E1 593 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 NEUROD6Q96NK8 337 aa14.55□□□□□ -0.08
TTC28-203ENST00000442232 ZBTB22O15209 634 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 BCAR3O75815 825 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 TIMM10P62072 90 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 PPATQ06203 517 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 KIF22Q14807 665 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 ZSCAN29Q8IWY8 852 aaPredicted RBP14.54□□□□□ -0.08
TTC28-203ENST00000442232 XAGE2Q96GT9 111 aa14.54□□□□□ -0.08
TTC28-203ENST00000442232 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
TTC28-203ENST00000442232 NFIAQ12857 509 aa14.53□□□□□ -0.08
TTC28-203ENST00000442232 OS9Q13438 667 aaPredicted RBP14.53□□□□□ -0.08
TTC28-203ENST00000442232 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
TTC28-203ENST00000442232 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
TTC28-203ENST00000442232 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
TTC28-203ENST00000442232 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
TTC28-203ENST00000442232 TNRC18O15417 2968 aaPredicted RBP14.52□□□□□ -0.08
TTC28-203ENST00000442232 GAKO14976 1311 aa14.52□□□□□ -0.08
TTC28-203ENST00000442232 IRF6O14896 467 aa14.52□□□□□ -0.09
TTC28-203ENST00000442232 ENTPD3O75355 529 aa14.52□□□□□ -0.09
TTC28-203ENST00000442232 INPP5BP32019 993 aa14.52□□□□□ -0.09
TTC28-203ENST00000442232 RGS3P49796 1198 aa14.52□□□□□ -0.09
TTC28-203ENST00000442232 GSTO1P78417 241 aa14.52□□□□□ -0.09
TTC28-203ENST00000442232 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.09
TTC28-203ENST00000442232 DOCK1Q14185 1865 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 MROH7-TTC4A0A0A0MT08 1334 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 LDHCP07864 332 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 BTDP43251 543 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 PICALMQ13492 652 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 NOL9Q5SY16 702 aaKnown RBP14.51□□□□□ -0.09
TTC28-203ENST00000442232 TMEM57Q8N5G2 664 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
TTC28-203ENST00000442232 NOL10Q9BSC4 688 aaKnown RBP14.51□□□□□ -0.09
TTC28-203ENST00000442232 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 ZNF112Q9UJU3 913 aa14.51□□□□□ -0.09
TTC28-203ENST00000442232 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 TLR2O60603 784 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 UQCRFS1P1P0C7P4 283 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 ANKRD23Q86SG2 305 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 SPATA5Q8NB90 893 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 RAI14Q9P0K7 980 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 TNNQ9UQP3 1299 aa14.5□□□□□ -0.09
TTC28-203ENST00000442232 PNMA6EA0A0J9YXQ4 647 aa14.49□□□□□ -0.09
TTC28-203ENST00000442232 MECOMQ03112 1051 aa14.49□□□□□ -0.09
TTC28-203ENST00000442232 SLC9C1Q4G0N8 1177 aa14.49□□□□□ -0.09
TTC28-203ENST00000442232 DIEXFQ68CQ4 756 aaKnown RBP14.49□□□□□ -0.09
TTC28-203ENST00000442232 ITPRIPQ8IWB1 547 aa14.49□□□□□ -0.09
TTC28-203ENST00000442232 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
TTC28-203ENST00000442232 RFX7Q2KHR2 1363 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 MAP4K4O95819 1239 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms