RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
PTPRN-205ENST00000440552 ANKRD23Q86SG2 305 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
PTPRN-205ENST00000440552 PTPRCP08575 1304 aa17.78■□□□□ 0.44
PTPRN-205ENST00000440552 ANP32CO43423 234 aa17.78■□□□□ 0.44
PTPRN-205ENST00000440552 MRPL50Q8N5N7 158 aaKnown RBP17.78■□□□□ 0.44
PTPRN-205ENST00000440552 ZSWIM8A7E2V4 1837 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 ADGRA2Q96PE1 1338 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 INPP5BP32019 993 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 LPIN2Q92539 896 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 SRRDQ9UH36 339 aa17.77■□□□□ 0.44
PTPRN-205ENST00000440552 COLQQ9Y215 455 aaPredicted RBP17.77■□□□□ 0.44
PTPRN-205ENST00000440552 ZNF521Q96K83 1311 aa17.76■□□□□ 0.43
PTPRN-205ENST00000440552 EYA2O00167 538 aa17.76■□□□□ 0.43
PTPRN-205ENST00000440552 SLC5A1P13866 664 aa17.76■□□□□ 0.43
PTPRN-205ENST00000440552 HOXD10P28358 340 aa17.76■□□□□ 0.43
PTPRN-205ENST00000440552 NOL9Q5SY16 702 aaKnown RBP17.76■□□□□ 0.43
PTPRN-205ENST00000440552 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
PTPRN-205ENST00000440552 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
PTPRN-205ENST00000440552 H0YGN5 161 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 PDHXO00330 501 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 CTGFP29279 349 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 PSMC4P43686 418 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 RFX5P48382 616 aaPredicted RBP17.75■□□□□ 0.43
PTPRN-205ENST00000440552 MOGSQ13724 837 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 CPA4Q9UI42 421 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 DAGLAQ9Y4D2 1042 aa17.75■□□□□ 0.43
PTPRN-205ENST00000440552 MYH13Q9UKX3 1938 aa17.74■□□□□ 0.43
PTPRN-205ENST00000440552 CXCL11O14625 94 aa17.74■□□□□ 0.43
PTPRN-205ENST00000440552 ZBTB22O15209 634 aa17.74■□□□□ 0.43
PTPRN-205ENST00000440552 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
PTPRN-205ENST00000440552 CDC42EP5Q6NZY7 148 aa17.74■□□□□ 0.43
PTPRN-205ENST00000440552 NKX2-3Q8TAU0 364 aa17.74■□□□□ 0.43
PTPRN-205ENST00000440552 AK9Q5TCS8 1911 aa17.73■□□□□ 0.43
PTPRN-205ENST00000440552 OSBPP22059 807 aa17.73■□□□□ 0.43
PTPRN-205ENST00000440552 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
PTPRN-205ENST00000440552 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
PTPRN-205ENST00000440552 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 GJB1P08034 283 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 GRK4P32298 578 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 NFIAQ12857 509 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 MTFR1Q15390 333 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 ATG9AQ7Z3C6 839 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 UBE2Q1Q7Z7E8 422 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 RAET1EQ8TD07 263 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
PTPRN-205ENST00000440552 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
PTPRN-205ENST00000440552 SEMA3EO15041 775 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 CIAO1O76071 339 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
PTPRN-205ENST00000440552 BCRP11274 1271 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
PTPRN-205ENST00000440552 GJA8P48165 433 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 TCP10Q12799 353 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 DIXDC1Q155Q3 683 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
PTPRN-205ENST00000440552 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
PTPRN-205ENST00000440552 MYPNQ86TC9 1320 aa17.71■□□□□ 0.42
PTPRN-205ENST00000440552 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
PTPRN-205ENST00000440552 LDHBP07195 334 aaKnown RBP17.7■□□□□ 0.42
PTPRN-205ENST00000440552 PRDX5P30044 214 aa17.7■□□□□ 0.42
PTPRN-205ENST00000440552 GPAT2Q6NUI2 795 aa17.7■□□□□ 0.42
PTPRN-205ENST00000440552 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
PTPRN-205ENST00000440552 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
PTPRN-205ENST00000440552 CCL5P13501 91 aa17.69■□□□□ 0.42
PTPRN-205ENST00000440552 FCGRTP55899 365 aa17.69■□□□□ 0.42
PTPRN-205ENST00000440552 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
PTPRN-205ENST00000440552 FASTKD5Q7L8L6 764 aaKnown RBP17.69■□□□□ 0.42
PTPRN-205ENST00000440552 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
PTPRN-205ENST00000440552 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
PTPRN-205ENST00000440552 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 E9PSI1 815 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 ENTPD3O75355 529 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 CAPN2P17655 700 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 UBXN2AP68543 259 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 SLAIN1Q8ND83 568 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 CEP126Q9P2H0 1117 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
PTPRN-205ENST00000440552 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
PTPRN-205ENST00000440552 MGAMO43451 1857 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
PTPRN-205ENST00000440552 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
PTPRN-205ENST00000440552 PRKCZQ05513 592 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
PTPRN-205ENST00000440552 ZFPM1Q8IX07 1006 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 ZGPATQ8N5A5 531 aaKnown RBP17.67■□□□□ 0.42
PTPRN-205ENST00000440552 DPF3Q92784 378 aa17.67■□□□□ 0.42
PTPRN-205ENST00000440552 RNF208Q9H0X6 261 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms