RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 CPA4Q9UI42 421 aa25.94■■□□□ 1.74
TRIM39-210ENST00000440271 SUGT1Q9Y2Z0 365 aa25.94■■□□□ 1.74
TRIM39-210ENST00000440271 MAST3O60307 1309 aa25.93■■□□□ 1.74
TRIM39-210ENST00000440271 MTFR1Q15390 333 aa25.93■■□□□ 1.74
TRIM39-210ENST00000440271 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.93■■□□□ 1.74
TRIM39-210ENST00000440271 SRRDQ9UH36 339 aa25.93■■□□□ 1.74
TRIM39-210ENST00000440271 INPP5BP32019 993 aa25.92■■□□□ 1.74
TRIM39-210ENST00000440271 PSMC4P43686 418 aa25.92■■□□□ 1.74
TRIM39-210ENST00000440271 ANKRD23Q86SG2 305 aa25.92■■□□□ 1.74
TRIM39-210ENST00000440271 ANKRD44Q8N8A2 993 aa25.92■■□□□ 1.74
TRIM39-210ENST00000440271 TRIM47Q96LD4 638 aa25.92■■□□□ 1.74
TRIM39-210ENST00000440271 RPAP1Q9BWH6 1393 aaPredicted RBP25.92■■□□□ 1.74
TRIM39-210ENST00000440271 PDHXO00330 501 aa25.91■■□□□ 1.74
TRIM39-210ENST00000440271 SHISA4Q96DD7 197 aa25.91■■□□□ 1.74
TRIM39-210ENST00000440271 TRIOBPQ9H2D6 2365 aa25.91■■□□□ 1.74
TRIM39-210ENST00000440271 HOXD10P28358 340 aa25.9■■□□□ 1.74
TRIM39-210ENST00000440271 CHRDL2Q6WN34 429 aa25.9■■□□□ 1.74
TRIM39-210ENST00000440271 KLHDC4Q8TBB5 520 aa25.9■■□□□ 1.74
TRIM39-210ENST00000440271 DPF3Q92784 378 aa25.9■■□□□ 1.74
TRIM39-210ENST00000440271 FMNL1O95466 1100 aaPredicted RBP25.89■■□□□ 1.74
TRIM39-210ENST00000440271 OSBPP22059 807 aa25.89■■□□□ 1.74
TRIM39-210ENST00000440271 RAET1EQ8TD07 263 aa25.89■■□□□ 1.74
TRIM39-210ENST00000440271 FAM151AQ8WW52 585 aa25.89■■□□□ 1.74
TRIM39-210ENST00000440271 ZNF112Q9UJU3 913 aa25.89■■□□□ 1.74
TRIM39-210ENST00000440271 KCNH4Q9UQ05 1017 aa25.89■■□□□ 1.74
TRIM39-210ENST00000440271 IFIT1P09914 478 aaKnown RBP25.88■■□□□ 1.73
TRIM39-210ENST00000440271 FGFR2P21802 821 aa25.88■■□□□ 1.73
TRIM39-210ENST00000440271 GRK4P32298 578 aa25.88■■□□□ 1.73
TRIM39-210ENST00000440271 NKX2-3Q8TAU0 364 aa25.88■■□□□ 1.73
TRIM39-210ENST00000440271 KIF16BQ96L93 1317 aa25.88■■□□□ 1.73
TRIM39-210ENST00000440271 ADGRA2Q96PE1 1338 aa25.88■■□□□ 1.73
TRIM39-210ENST00000440271 PUM3Q15397 648 aaKnown RBP25.87■■□□□ 1.73
TRIM39-210ENST00000440271 TCP10Q12799 353 aa25.86■■□□□ 1.73
TRIM39-210ENST00000440271 MOGSQ13724 837 aa25.86■■□□□ 1.73
TRIM39-210ENST00000440271 WDR66Q8TBY9 1149 aa25.86■■□□□ 1.73
TRIM39-210ENST00000440271 GJB1P08034 283 aa25.85■■□□□ 1.73
TRIM39-210ENST00000440271 GJA8P48165 433 aa25.85■■□□□ 1.73
TRIM39-210ENST00000440271 CDC42EP5Q6NZY7 148 aa25.85■■□□□ 1.73
TRIM39-210ENST00000440271 RBM27Q9P2N5 1060 aaKnown RBP25.85■■□□□ 1.73
TRIM39-210ENST00000440271 MYPNQ86TC9 1320 aa25.85■■□□□ 1.73
TRIM39-210ENST00000440271 CCL5P13501 91 aa25.84■■□□□ 1.73
TRIM39-210ENST00000440271 UBE2Q1Q7Z7E8 422 aa25.84■■□□□ 1.73
TRIM39-210ENST00000440271 DAGLAQ9Y4D2 1042 aa25.84■■□□□ 1.73
TRIM39-210ENST00000440271 NFIAQ12857 509 aa25.83■■□□□ 1.73
TRIM39-210ENST00000440271 NOL9Q5SY16 702 aaKnown RBP25.83■■□□□ 1.73
TRIM39-210ENST00000440271 RNF208Q9H0X6 261 aa25.83■■□□□ 1.73
TRIM39-210ENST00000440271 BIN2Q9UBW5 565 aaPredicted RBP25.83■■□□□ 1.73
TRIM39-210ENST00000440271 SLC5A1P13866 664 aa25.82■■□□□ 1.72
TRIM39-210ENST00000440271 DIXDC1Q155Q3 683 aa25.82■■□□□ 1.72
TRIM39-210ENST00000440271 GPAT2Q6NUI2 795 aa25.82■■□□□ 1.72
TRIM39-210ENST00000440271 LPIN2Q92539 896 aa25.82■■□□□ 1.72
TRIM39-210ENST00000440271 PARK7Q99497 189 aaKnown RBP25.82■■□□□ 1.72
TRIM39-210ENST00000440271 HTATIP2Q9BUP3 242 aa25.82■■□□□ 1.72
TRIM39-210ENST00000440271 CXCL11O14625 94 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 BCRP11274 1271 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
TRIM39-210ENST00000440271 FCGRTP55899 365 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 PRKCZQ05513 592 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 MRPL50Q8N5N7 158 aaKnown RBP25.81■■□□□ 1.72
TRIM39-210ENST00000440271 USP44Q9H0E7 712 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 FAM198AQ9UFP1 575 aa25.81■■□□□ 1.72
TRIM39-210ENST00000440271 EYA2O00167 538 aa25.8■■□□□ 1.72
TRIM39-210ENST00000440271 CYP2C8P10632 490 aa25.8■■□□□ 1.72
TRIM39-210ENST00000440271 UBXN2AP68543 259 aa25.8■■□□□ 1.72
TRIM39-210ENST00000440271 USP40Q9NVE5 1235 aa25.8■■□□□ 1.72
TRIM39-210ENST00000440271 PRDX5P30044 214 aa25.79■■□□□ 1.72
TRIM39-210ENST00000440271 RFX5P48382 616 aaPredicted RBP25.79■■□□□ 1.72
TRIM39-210ENST00000440271 ZFPM1Q8IX07 1006 aa25.78■■□□□ 1.72
TRIM39-210ENST00000440271 SLAIN1Q8ND83 568 aa25.78■■□□□ 1.72
TRIM39-210ENST00000440271 GABRQQ9UN88 632 aa25.78■■□□□ 1.72
TRIM39-210ENST00000440271 SZT2Q5T011 3432 aa25.78■■□□□ 1.72
TRIM39-210ENST00000440271 U2AF1L4Q8WU68 220 aaKnown RBP25.77■■□□□ 1.72
TRIM39-210ENST00000440271 PRO3102Q9H379 93 aa25.77■■□□□ 1.72
TRIM39-210ENST00000440271 NR2E3Q9Y5X4 410 aa25.77■■□□□ 1.72
TRIM39-210ENST00000440271 PTPRCP08575 1304 aa25.77■■□□□ 1.72
TRIM39-210ENST00000440271 AK9Q5TCS8 1911 aa25.76■■□□□ 1.72
TRIM39-210ENST00000440271 LDHBP07195 334 aaKnown RBP25.76■■□□□ 1.71
TRIM39-210ENST00000440271 FASTKD5Q7L8L6 764 aaKnown RBP25.76■■□□□ 1.71
TRIM39-210ENST00000440271 ATG9AQ7Z3C6 839 aa25.76■■□□□ 1.71
TRIM39-210ENST00000440271 UNC93B1Q9H1C4 597 aa25.76■■□□□ 1.71
TRIM39-210ENST00000440271 ZHX2Q9Y6X8 837 aa25.76■■□□□ 1.71
TRIM39-210ENST00000440271 PHF20L1A8MW92 1017 aa25.75■■□□□ 1.71
TRIM39-210ENST00000440271 ANP32CO43423 234 aa25.75■■□□□ 1.71
TRIM39-210ENST00000440271 FARP2O94887 1054 aaPredicted RBP25.75■■□□□ 1.71
TRIM39-210ENST00000440271 RANBP2P49792 3224 aaKnown RBP25.75■■□□□ 1.71
TRIM39-210ENST00000440271 A0A0G2JLL6 359 aaPredicted RBP25.74■■□□□ 1.71
TRIM39-210ENST00000440271 SGPL1O95470 568 aa25.74■■□□□ 1.71
TRIM39-210ENST00000440271 PRRT2Q7Z6L0 340 aaPredicted RBP25.74■■□□□ 1.71
TRIM39-210ENST00000440271 SCYL3Q8IZE3 742 aa25.74■■□□□ 1.71
TRIM39-210ENST00000440271 GNL3LQ9NVN8 582 aaKnown RBP25.74■■□□□ 1.71
TRIM39-210ENST00000440271 ZBTB7BO15156 539 aaPredicted RBP25.73■■□□□ 1.71
TRIM39-210ENST00000440271 ADCY3O60266 1144 aa25.73■■□□□ 1.71
TRIM39-210ENST00000440271 PTPRAP18433 802 aa25.73■■□□□ 1.71
TRIM39-210ENST00000440271 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
TRIM39-210ENST00000440271 PICK1Q9NRD5 415 aa25.73■■□□□ 1.71
TRIM39-210ENST00000440271 AFG3L2Q9Y4W6 797 aa25.73■■□□□ 1.71
TRIM39-210ENST00000440271 ATRNL1Q5VV63 1379 aa25.72■■□□□ 1.71
TRIM39-210ENST00000440271 SALL1Q9NSC2 1324 aa25.72■■□□□ 1.71
TRIM39-210ENST00000440271 FLT3LGP49771 235 aa25.72■■□□□ 1.71
TRIM39-210ENST00000440271 RGS3P49796 1198 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms