RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 NCOA7Q8NI08 942 aa9.24□□□□□ -0.93
APP-209ENST00000440126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.24□□□□□ -0.93
APP-209ENST00000440126 ZNF592Q92610 1267 aa9.24□□□□□ -0.93
APP-209ENST00000440126 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
APP-209ENST00000440126 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
APP-209ENST00000440126 MYH7P12883 1935 aa9.24□□□□□ -0.93
APP-209ENST00000440126 COL22A1Q8NFW1 1626 aaPredicted RBP9.24□□□□□ -0.93
APP-209ENST00000440126 MROH5Q6ZUA9 1318 aa9.24□□□□□ -0.93
APP-209ENST00000440126 TCRBV5S4A2TA0A5A2 114 aa9.24□□□□□ -0.93
APP-209ENST00000440126 CPLX1O14810 134 aa9.24□□□□□ -0.93
APP-209ENST00000440126 PTMAP06454 111 aaKnown RBP9.24□□□□□ -0.93
APP-209ENST00000440126 MCM5P33992 734 aa9.24□□□□□ -0.93
APP-209ENST00000440126 TDO2P48775 406 aa9.24□□□□□ -0.93
APP-209ENST00000440126 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
APP-209ENST00000440126 CBX1P83916 185 aa9.24□□□□□ -0.93
APP-209ENST00000440126 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
APP-209ENST00000440126 NBPF5PQ86XG9 351 aaPredicted RBP9.24□□□□□ -0.93
APP-209ENST00000440126 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
APP-209ENST00000440126 NAPBQ9H115 298 aa9.24□□□□□ -0.93
APP-209ENST00000440126 ORC3Q9UBD5 711 aaPredicted RBP9.24□□□□□ -0.93
APP-209ENST00000440126 CTNNA3Q9UI47 895 aa9.24□□□□□ -0.93
APP-209ENST00000440126 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
APP-209ENST00000440126 SLC4A4Q9Y6R1 1079 aa9.24□□□□□ -0.93
APP-209ENST00000440126 BCL9LQ86UU0 1499 aa9.24□□□□□ -0.93
APP-209ENST00000440126 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
APP-209ENST00000440126 CYP7A1P22680 504 aa9.23□□□□□ -0.93
APP-209ENST00000440126 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
APP-209ENST00000440126 TRDNQ13061 729 aa9.23□□□□□ -0.93
APP-209ENST00000440126 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
APP-209ENST00000440126 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
APP-209ENST00000440126 TXNRD3Q86VQ6 643 aa9.23□□□□□ -0.93
APP-209ENST00000440126 ANKRD18AQ8IVF6 992 aa9.23□□□□□ -0.93
APP-209ENST00000440126 C17orf53Q8N3J3 647 aaPredicted RBP9.23□□□□□ -0.93
APP-209ENST00000440126 SMARCC2Q8TAQ2 1214 aa9.23□□□□□ -0.93
APP-209ENST00000440126 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
APP-209ENST00000440126 hCG_1642624A0A1W2PR95 340 aa9.23□□□□□ -0.93
APP-209ENST00000440126 CLGNO14967 610 aa9.23□□□□□ -0.93
APP-209ENST00000440126 AP5Z1O43299 807 aa9.23□□□□□ -0.93
APP-209ENST00000440126 IFNL3Q8IZI9 196 aa9.23□□□□□ -0.93
APP-209ENST00000440126 PPP1R9BQ96SB3 815 aa9.23□□□□□ -0.93
APP-209ENST00000440126 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
APP-209ENST00000440126 KIF28PB7ZC32 967 aa9.23□□□□□ -0.93
APP-209ENST00000440126 UQCRFS1P1P0C7P4 283 aa9.23□□□□□ -0.93
APP-209ENST00000440126 CDC27P30260 824 aa9.23□□□□□ -0.93
APP-209ENST00000440126 MAP3K12Q12852 859 aa9.23□□□□□ -0.93
APP-209ENST00000440126 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
APP-209ENST00000440126 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
APP-209ENST00000440126 SPC24Q8NBT2 197 aa9.23□□□□□ -0.93
APP-209ENST00000440126 ALDH8A1Q9H2A2 487 aaPredicted RBP9.23□□□□□ -0.93
APP-209ENST00000440126 ZNF652Q9Y2D9 606 aa9.23□□□□□ -0.93
APP-209ENST00000440126 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
APP-209ENST00000440126 ZPR1O75312 459 aa9.22□□□□□ -0.93
APP-209ENST00000440126 TTF1Q15361 905 aaPredicted RBP9.22□□□□□ -0.93
APP-209ENST00000440126 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
APP-209ENST00000440126 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
APP-209ENST00000440126 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
APP-209ENST00000440126 NUP62CLQ9H1M0 184 aa9.22□□□□□ -0.93
APP-209ENST00000440126 MINPP1Q9UNW1 487 aa9.22□□□□□ -0.93
APP-209ENST00000440126 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
APP-209ENST00000440126 ME1P48163 572 aa9.22□□□□□ -0.93
APP-209ENST00000440126 TMEM67Q5HYA8 995 aa9.22□□□□□ -0.93
APP-209ENST00000440126 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
APP-209ENST00000440126 PIBF1Q8WXW3 757 aa9.22□□□□□ -0.93
APP-209ENST00000440126 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
APP-209ENST00000440126 SETDB2Q96T68 719 aa9.22□□□□□ -0.93
APP-209ENST00000440126 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
APP-209ENST00000440126 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
APP-209ENST00000440126 ZSWIM5Q9P217 1185 aa9.22□□□□□ -0.93
APP-209ENST00000440126 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
APP-209ENST00000440126 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.93
APP-209ENST00000440126 PSEN1P49768 467 aa9.21□□□□□ -0.93
APP-209ENST00000440126 UBE3CQ15386 1083 aa9.21□□□□□ -0.93
APP-209ENST00000440126 ZSCAN25Q6NSZ9 544 aa9.21□□□□□ -0.93
APP-209ENST00000440126 FAM196AQ6ZSG2 479 aa9.21□□□□□ -0.93
APP-209ENST00000440126 AGXT2Q9BYV1 514 aa9.21□□□□□ -0.93
APP-209ENST00000440126 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.93
APP-209ENST00000440126 IFIT3O14879 490 aaKnown RBP9.21□□□□□ -0.94
APP-209ENST00000440126 ADCY5O95622 1261 aa9.21□□□□□ -0.94
APP-209ENST00000440126 ATP2B1P20020 1258 aa9.21□□□□□ -0.94
APP-209ENST00000440126 MARCKSP29966 332 aaPredicted RBP9.21□□□□□ -0.94
APP-209ENST00000440126 METAP2P50579 478 aaKnown RBP eCLIP9.21□□□□□ -0.94
APP-209ENST00000440126 VPS72Q15906 364 aa9.21□□□□□ -0.94
APP-209ENST00000440126 CDC5LQ99459 802 aaKnown RBP9.21□□□□□ -0.94
APP-209ENST00000440126 MTMR7Q9Y216 660 aa9.21□□□□□ -0.94
APP-209ENST00000440126 A0A1B0GVL5 298 aa9.2□□□□□ -0.94
APP-209ENST00000440126 GUCY1A2P33402 732 aa9.2□□□□□ -0.94
APP-209ENST00000440126 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
APP-209ENST00000440126 CCAR1Q8IX12 1150 aaKnown RBP9.2□□□□□ -0.94
APP-209ENST00000440126 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
APP-209ENST00000440126 ZNF274Q96GC6 653 aaPredicted RBP9.2□□□□□ -0.94
APP-209ENST00000440126 SCAND2PQ9GZW5 306 aaPredicted RBP9.2□□□□□ -0.94
APP-209ENST00000440126 TTC12Q9H892 705 aaPredicted RBP9.2□□□□□ -0.94
APP-209ENST00000440126 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
APP-209ENST00000440126 ANGEL1Q9UNK9 670 aaKnown RBP9.2□□□□□ -0.94
APP-209ENST00000440126 SALL1Q9NSC2 1324 aa9.2□□□□□ -0.94
APP-209ENST00000440126 BAZ2AQ9UIF9 1905 aaKnown RBP9.2□□□□□ -0.94
APP-209ENST00000440126 PRDX5P30044 214 aa9.2□□□□□ -0.94
APP-209ENST00000440126 MAP3K11Q16584 847 aa9.2□□□□□ -0.94
APP-209ENST00000440126 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
APP-209ENST00000440126 ANO6Q4KMQ2 910 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms