RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 KDM5AP29375 1690 aaKnown RBP13.04□□□□□ -0.32
CCBE1-202ENST00000439986 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 CHST3Q7LGC8 479 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 GTF3C6Q969F1 213 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 ALG1Q9BT22 464 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 ERVK-7P63135 1459 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 RFC4P35249 363 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
CCBE1-202ENST00000439986 FAM114A2Q9NRY5 505 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 SYNMO15061 1565 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
CCBE1-202ENST00000439986 RPS6KB1P23443 525 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 ARID5AQ03989 594 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.32
CCBE1-202ENST00000439986 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 CABP5Q9NP86 173 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.32
CCBE1-202ENST00000439986 A0A1B0GVL5 298 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 SLC27A2O14975 620 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 S100BP04271 92 aaPredicted RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 DHX32Q7L7V1 743 aaKnown RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 A0A1B0GUL7 405 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 BASP1P80723 227 aaKnown RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 KANK3Q6NY19 840 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
CCBE1-202ENST00000439986 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
CCBE1-202ENST00000439986 FAPQ12884 760 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 LRRC23Q53EV4 343 aaPredicted RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 RRAGBQ5VZM2 374 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 PRPF31Q8WWY3 499 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 N4BP3O15049 544 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CALM1P0DP23 149 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CALM2P0DP24 149 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CALM3P0DP25 149 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 ELF2Q15723 593 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 SHQ1Q6PI26 577 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 TMTC2Q8N394 836 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 FAM227BQ96M60 508 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CHCHD3Q9NX63 227 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 GBP6Q6ZN66 633 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 EXOC5O00471 708 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CETN1Q12798 172 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 RMI1Q9H9A7 625 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
CCBE1-202ENST00000439986 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
CCBE1-202ENST00000439986 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
CCBE1-202ENST00000439986 PDE4BQ07343 736 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CTAGE15A4D2H0 777 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CTAGE8P0CG41 777 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CTAGE6Q86UF2 777 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CTAGE4Q8IX94 777 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 EPSTI1Q96J88 318 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CALR3Q96L12 384 aaKnown RBP13□□□□□ -0.33
CCBE1-202ENST00000439986 WDR3Q9UNX4 943 aaKnown RBP eCLIP13□□□□□ -0.33
CCBE1-202ENST00000439986 SMIM23A6NLE4 172 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 PHACTR2O75167 634 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 HLA-DOAP06340 250 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 MXRA7P84157 204 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 AMPD3Q01432 767 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 GABPB1Q06547 395 aaPredicted RBP13□□□□□ -0.33
CCBE1-202ENST00000439986 CCDC174Q6PII3 467 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 GOLGA1Q92805 767 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 CEP83Q9Y592 693 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 ATG3Q9NT62 314 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 PAG1Q9NWQ8 432 aa13□□□□□ -0.33
CCBE1-202ENST00000439986 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
CCBE1-202ENST00000439986 ZBTB43O43298 467 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms