RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RASGRF1Q13972 1273 aa20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 PKN2Q16513 984 aaKnown RBP20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 CSADQ9Y600 493 aa20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 PNMA6EA0A0J9YXQ4 647 aa20.14■□□□□ 0.81
SNRPD3-204ENST00000439775 OTUD7BQ6GQQ9 843 aa20.14■□□□□ 0.81
SNRPD3-204ENST00000439775 CDC42EP5Q6NZY7 148 aa20.14■□□□□ 0.81
SNRPD3-204ENST00000439775 XAGE2Q96GT9 111 aa20.14■□□□□ 0.81
SNRPD3-204ENST00000439775 R3HDMLQ9H3Y0 253 aa20.14■□□□□ 0.81
SNRPD3-204ENST00000439775 FKTNO75072 461 aa20.13■□□□□ 0.81
SNRPD3-204ENST00000439775 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
SNRPD3-204ENST00000439775 FAM151AQ8WW52 585 aa20.13■□□□□ 0.81
SNRPD3-204ENST00000439775 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
SNRPD3-204ENST00000439775 GAKO14976 1311 aa20.12■□□□□ 0.81
SNRPD3-204ENST00000439775 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
SNRPD3-204ENST00000439775 WRNIP1Q96S55 665 aa20.12■□□□□ 0.81
SNRPD3-204ENST00000439775 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
SNRPD3-204ENST00000439775 SPDYE5A6NIY4 337 aa20.11■□□□□ 0.81
SNRPD3-204ENST00000439775 G3BP1Q13283 466 aaKnown RBP eCLIP20.11■□□□□ 0.813e-6■■□□□ 12.9
SNRPD3-204ENST00000439775 POLA2Q14181 598 aa20.11■□□□□ 0.81
SNRPD3-204ENST00000439775 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
SNRPD3-204ENST00000439775 PTPN18Q99952 460 aa20.11■□□□□ 0.81
SNRPD3-204ENST00000439775 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
SNRPD3-204ENST00000439775 RFX7Q2KHR2 1363 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 GTF2A2P52657 109 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 NFIAQ12857 509 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 DZIP1Q86YF9 867 aaKnown RBP20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 OTUD5Q96G74 571 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 FAM198AQ9UFP1 575 aa20.1■□□□□ 0.81
SNRPD3-204ENST00000439775 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 CRHR2Q13324 411 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 ERO1BQ86YB8 467 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 FAM163AQ96GL9 167 aaPredicted RBP20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 NEUROD6Q96NK8 337 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 USP40Q9NVE5 1235 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
SNRPD3-204ENST00000439775 RLBP1P12271 317 aa20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 MLLT1Q03111 559 aaPredicted RBP20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 TCP10Q12799 353 aa20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 ITPRIPQ8IWB1 547 aa20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 BRI3BPQ8WY22 251 aa20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 IDI2Q9BXS1 227 aa20.08■□□□□ 0.81
SNRPD3-204ENST00000439775 CCL15-CCL14A0A0B4J2E2 113 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 CCL15Q16663 113 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 GORABQ5T7V8 394 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 MIGA2Q7L4E1 593 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 ZKSCAN4Q969J2 545 aaPredicted RBP20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 GPR108Q9NPR9 543 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 HMG20BQ9P0W2 317 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 ZNF112Q9UJU3 913 aa20.07■□□□□ 0.8
SNRPD3-204ENST00000439775 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 MYH2Q9UKX2 1941 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 ENTPD3O75355 529 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 PPIL2Q13356 520 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 SPATA5Q8NB90 893 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 ZCCHC17Q9NP64 241 aaKnown RBP20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
SNRPD3-204ENST00000439775 HTTP42858 3142 aa20.05■□□□□ 0.8
SNRPD3-204ENST00000439775 UQCRFS1P1P0C7P4 283 aa20.05■□□□□ 0.8
SNRPD3-204ENST00000439775 MECOMQ03112 1051 aa20.05■□□□□ 0.8
SNRPD3-204ENST00000439775 ERO1AQ96HE7 468 aa20.05■□□□□ 0.8
SNRPD3-204ENST00000439775 IRF6O14896 467 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 CETPP11597 493 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 INPP5BP32019 993 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 BTDP43251 543 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 RGS3P49796 1198 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 PPATQ06203 517 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 SNAPC2Q13487 334 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 TNNI3KQ59H18 835 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 NOL9Q5SY16 702 aaKnown RBP20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 FPGT-TNNI3KV9GXZ4 949 aa20.04■□□□□ 0.8
SNRPD3-204ENST00000439775 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 WDHD1O75717 1129 aaPredicted RBP20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 MCAMP43121 646 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 GSTO1P78417 241 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 OS9Q13438 667 aaPredicted RBP20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 OTOP1Q7RTM1 612 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 ZFPM1Q8IX07 1006 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 FAM43AQ8N2R8 423 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 ZNF384Q8TF68 577 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 ZFYVE28Q9HCC9 887 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 NOP58Q9Y2X3 529 aaKnown RBP20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 DOCK2Q92608 1830 aa20.03■□□□□ 0.8
SNRPD3-204ENST00000439775 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
SNRPD3-204ENST00000439775 MAP4K4O95819 1239 aaPredicted RBP20.02■□□□□ 0.8
SNRPD3-204ENST00000439775 SP3Q02447 781 aa20.02■□□□□ 0.8
SNRPD3-204ENST00000439775 TAF1CQ15572 869 aaPredicted RBP20.02■□□□□ 0.8
SNRPD3-204ENST00000439775 NSUN4Q96CB9 384 aaKnown RBP20.02■□□□□ 0.8
SNRPD3-204ENST00000439775 TRIM17Q9Y577 477 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms