RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 ATP1A3P13637 1013 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 IL2RBP14784 551 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 FHOD1Q9Y613 1164 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 MYO1BO43795 1136 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 CLCN6P51797 869 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 TRIM65Q6PJ69 517 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 CBFA2T2O43439 604 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 PPP6R2O75170 966 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 SYKP43405 635 aa17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDC42EP4-202ENST00000439510 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 CABP4P57796 275 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 MYL5Q02045 173 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 FCHSD1Q86WN1 690 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 APPBP2Q92624 585 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 NPHP1O15259 732 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-202ENST00000439510 UBASH3AP57075 661 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 ZMYM6O95789 1325 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 BRD2P25440 801 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 PTPAQ15257 358 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 ARHGAP29Q52LW3 1261 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 VSTM4Q8IW00 320 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 DNAI1Q9UI46 699 aa17.6■□□□□ 0.41
CDC42EP4-202ENST00000439510 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 SHC4Q6S5L8 630 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 DPF2Q92785 391 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 ZRANB2O95218 330 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 PUS7LQ9H0K6 701 aaKnown RBP17.59■□□□□ 0.41
CDC42EP4-202ENST00000439510 CCDC66A2RUB6 948 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 ZNF213O14771 459 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 FANCGO15287 622 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 PNMA6AP0CW24 399 aaPredicted RBP17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 RESP18Q5W5W9 173 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 VPS37DQ86XT2 251 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 RAB11FIP4Q86YS3 637 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 XAGE2Q96GT9 111 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 MAP3K14Q99558 947 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 AKAP2Q9Y2D5 859 aa17.58■□□□□ 0.41
CDC42EP4-202ENST00000439510 ADORA1P30542 326 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 ISM2Q6H9L7 571 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 LRP6O75581 1613 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 EP400Q96L91 3159 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 AKAP11Q9UKA4 1901 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 PAPPAQ13219 1627 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 TADA3O75528 432 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 SERPINC1P01008 464 aa17.58■□□□□ 0.4
CDC42EP4-202ENST00000439510 TMEM139Q8IV31 216 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 UBXN4Q92575 508 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 NBPF3Q9H094 633 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 ANGEL1Q9UNK9 670 aaKnown RBP17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 EFCAB8A8MWE9 144 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 GPAA1O43292 621 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 CDKL5O76039 1030 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 PNOCQ13519 176 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 SCARF1Q14162 830 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 ARGLU1Q9NWB6 273 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
CDC42EP4-202ENST00000439510 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 NRAPQ86VF7 1730 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 ATRNO75882 1429 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 KRT40Q6A162 431 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 ELOA2Q8IYF1 753 aaPredicted RBP17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 AIFM3Q96NN9 605 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 ZSCAN12O43309 604 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 ZAP70P43403 619 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 PLA2G4AP47712 749 aa17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
CDC42EP4-202ENST00000439510 ARHGAP6O43182 974 aa17.55■□□□□ 0.4
CDC42EP4-202ENST00000439510 TPM1P09493 284 aa17.55■□□□□ 0.4
CDC42EP4-202ENST00000439510 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
CDC42EP4-202ENST00000439510 BBXQ8WY36 941 aaPredicted RBP17.55■□□□□ 0.4
CDC42EP4-202ENST00000439510 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
CDC42EP4-202ENST00000439510 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms