RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 POLIQ9UNA4 740 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 CADPSQ9ULU8 1353 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 TNFRSF21O75509 655 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 EIF1AXP47813 144 aaKnown RBP5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 FBLN7Q53RD9 439 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 HP1BP3Q5SSJ5 553 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 SPRED2Q7Z698 418 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 HELQQ8TDG4 1101 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 SNX29Q8TEQ0 813 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 SLC38A3Q99624 504 aa5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 BHLHE41Q9C0J9 482 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P12-201ENST00000438594 CARMIL2Q6F5E8 1435 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 DYNC1LI2O43237 492 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 ATG7O95352 703 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 CYP11A1P05108 521 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 POLR3DP05423 398 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 CTSBP07858 339 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 PCDH1Q08174 1060 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 PDE3AQ14432 1141 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 CYP27C1Q4G0S4 372 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 ARHGAP27Q6ZUM4 889 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 ARID4BQ4LE39 1312 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P12-201ENST00000438594 BRD1O95696 1058 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 OGFOD3Q6PK18 319 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 PI4K2BQ8TCG2 481 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 SPATA32Q96LK8 384 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 PSMD1Q99460 953 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 ACSS3Q9H6R3 686 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 SLAIN2Q9P270 581 aa5.22□□□□□ -1.57
HMGB1P12-201ENST00000438594 A0A096LPE4 126 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 A0A1W2PPZ6 126 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 CD96P40200 585 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 MTMR3Q13615 1198 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 PEAR1Q5VY43 1037 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 ALKBH2Q6NS38 261 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 TMED8Q6PL24 325 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 SPOCD1Q6ZMY3 1216 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 DDX54Q8TDD1 881 aaKnown RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 GTF3C2Q8WUA4 911 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 MISP3Q96FF7 219 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 CLEC4MQ9H2X3 399 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 ZFYVE1Q9HBF4 777 aa5.21□□□□□ -1.58
HMGB1P12-201ENST00000438594 RBM47A0AV96 593 aaKnown RBP5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 ECEL1O95672 775 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 RNASE1P07998 156 aaKnown RBP5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 FAM87AP0C7U9 286 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 CD8BP10966 210 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 ZNF423Q2M1K9 1284 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 SPRED3Q2MJR0 410 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 SND1Q7KZF4 910 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 ATG4DQ86TL0 474 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 NETO1Q8TDF5 533 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 NRSN2Q9GZP1 204 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 LIN7BQ9HAP6 207 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 PIDD1Q9HB75 910 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 C1GALT1Q9NS00 363 aa5.2□□□□□ -1.58
HMGB1P12-201ENST00000438594 CLSTN1O94985 981 aa5.19□□□□□ -1.58
HMGB1P12-201ENST00000438594 FUT4P22083 530 aa5.19□□□□□ -1.58
HMGB1P12-201ENST00000438594 EHHADHQ08426 723 aa5.19□□□□□ -1.58
HMGB1P12-201ENST00000438594 KIAA1522Q9P206 1035 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P12-201ENST00000438594 AOC2O75106 756 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 NEFLP07196 543 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 USP5P45974 858 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 GRIA4P48058 902 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 SRPK2P78362 688 aaKnown RBP5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 SEZ6L2Q6UXD5 910 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 ANKRD13AQ8IZ07 590 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 LRRN4CLQ8ND94 238 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 GLIS3Q8NEA6 775 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 TMEM40Q8WWA1 233 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 ZFYVE28Q9HCC9 887 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 MBNL3Q9NUK0 354 aaKnown RBP5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 ADAMTS6Q9UKP5 1117 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 IVNS1ABPQ9Y6Y0 642 aa5.18□□□□□ -1.58
HMGB1P12-201ENST00000438594 LRRC10BA6NIK2 292 aa5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 RNGTTO60942 597 aaKnown RBP5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 AOC3Q16853 763 aa5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 ZC3H12CQ9C0D7 883 aaKnown RBP5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
HMGB1P12-201ENST00000438594 A0A1W2PP55 124 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 LIG1P18858 919 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 IRX6P78412 446 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 MLANAQ16655 118 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 CCNJLQ8IV13 435 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 PBXIP1Q96AQ6 731 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 FAM84AQ96KN4 292 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 HRASLS5Q96KN8 279 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 DRC1Q96MC2 740 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms