RNA–Protein interactions for RNA: ENST00000438354.6

LYVE1-202, Transcript of lymphatic vessel endothelial hyaluronan receptor 1, humanhuman

TSL 5

Gene LYVE1, Length 1,823 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYVE1-202ENST00000438354 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
LYVE1-202ENST00000438354 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
LYVE1-202ENST00000438354 SH3TC1Q8TE82 1336 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 SPEF2Q9C093 1822 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 CTHP32929 405 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 GREM2Q9H772 168 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 WWC3Q9ULE0 1092 aa8.86□□□□□ -0.99
LYVE1-202ENST00000438354 WTIPA6NIX2 430 aaPredicted RBP8.85□□□□□ -0.99
LYVE1-202ENST00000438354 ATP9BO43861 1147 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 NR1I2O75469 434 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 GNAI3P08754 354 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 RFX5P48382 616 aaPredicted RBP8.85□□□□□ -0.99
LYVE1-202ENST00000438354 PARP10Q53GL7 1025 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 TTLL11Q8NHH1 800 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 DRC1Q96MC2 740 aa8.85□□□□□ -0.99
LYVE1-202ENST00000438354 DNAJC2Q99543 621 aaKnown RBP8.85□□□□□ -0.99
LYVE1-202ENST00000438354 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 ATP8B2P98198 1209 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 RABL6Q3YEC7 729 aaPredicted RBP8.84□□□□□ -0.99
LYVE1-202ENST00000438354 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 PUS3Q9BZE2 481 aaKnown RBP8.84□□□□□ -0.99
LYVE1-202ENST00000438354 CHMP3Q9Y3E7 222 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 CDHR2Q9BYE9 1310 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 SRGAP3O43295 1099 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 DXOO77932 396 aaKnown RBP8.84□□□□□ -0.99
LYVE1-202ENST00000438354 CSF1RP07333 972 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 CHRNA5P30532 468 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 OLFM4Q6UX06 510 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 SPSB2Q99619 263 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 SIL1Q9H173 461 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 EXOC6BQ9Y2D4 811 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 PPME1Q9Y570 386 aa8.84□□□□□ -0.99
LYVE1-202ENST00000438354 KDM2BQ8NHM5 1336 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 CACNA1SQ13698 1873 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 RBM47A0AV96 593 aaKnown RBP8.83□□□□□ -1
LYVE1-202ENST00000438354 ANKRD62A6NC57 917 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 SNAP23O00161 211 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
LYVE1-202ENST00000438354 CTSWP56202 376 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
LYVE1-202ENST00000438354 LRRC24Q50LG9 513 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 SLC10A5Q5PT55 438 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 DEPDC4Q8N2C3 294 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 GPATCH11Q8N954 259 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 USTQ9Y2C2 406 aa8.83□□□□□ -1
LYVE1-202ENST00000438354 IBTKQ9P2D0 1353 aaPredicted RBP8.83□□□□□ -1
LYVE1-202ENST00000438354 KIAA1551Q9HCM1 1747 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 PDE8AO60658 829 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 MCCP23508 829 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 MSS51Q4VC12 460 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 PNMA1Q8ND90 353 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 SSH3Q8TE77 659 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 CELF1Q92879 486 aaKnown RBP8.82□□□□□ -1
LYVE1-202ENST00000438354 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 PLA2G12BQ9BX93 195 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 PARP3Q9Y6F1 533 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 ATG7O95352 703 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 ITGA6P23229 1130 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 MTX1Q13505 466 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
LYVE1-202ENST00000438354 MTFR1LQ9H019 292 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 KIAA1522Q9P206 1035 aaPredicted RBP8.82□□□□□ -1
LYVE1-202ENST00000438354 ZMIZ1Q9ULJ6 1067 aa8.82□□□□□ -1
LYVE1-202ENST00000438354 NPHP1O15259 732 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 TPD52L2O43399 206 aaKnown RBP8.81□□□□□ -1
LYVE1-202ENST00000438354 MMP16P51512 607 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 THSD4Q6ZMP0 1018 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 C16orf71Q8IYS4 520 aaPredicted RBP8.81□□□□□ -1
LYVE1-202ENST00000438354 NYXQ9GZU5 481 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 SUGT1Q9Y2Z0 365 aa8.81□□□□□ -1
LYVE1-202ENST00000438354 A0A0G2JLW4 131 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 USP17L3A6NCW0 530 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 USP17L4A6NCW7 530 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 SASH1O94885 1247 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 HDAC1Q13547 482 aaPredicted RBP8.8□□□□□ -1
LYVE1-202ENST00000438354 SF3B3Q15393 1217 aaKnown RBP8.8□□□□□ -1
LYVE1-202ENST00000438354 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 ATG9AQ7Z3C6 839 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 RPAP2Q8IXW5 612 aaPredicted RBP8.8□□□□□ -1
LYVE1-202ENST00000438354 NLGN2Q8NFZ4 835 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 STK32AQ8WU08 396 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 C10orf71Q711Q0 1435 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 A0A1B0GUL6 1792 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 USP17L5A8MUK1 530 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 SURF6O75683 361 aaKnown RBP8.8□□□□□ -1
LYVE1-202ENST00000438354 KCNA3P22001 575 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 KCNH2Q12809 1159 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 CRY2Q49AN0 593 aa8.8□□□□□ -1
LYVE1-202ENST00000438354 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms