RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NBPF3Q9H094 633 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 LIMCH1Q9UPQ0 1083 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SUGT1Q9Y2Z0 365 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 MROH7-TTC4A0A0A0MT08 1334 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 TDO2P48775 406 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 TBC1D10CQ8IV04 446 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 RTKN2Q8IZC4 609 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 AATFQ9NY61 560 aaKnown RBP eCLIP16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
HLA-DPA1-243ENST00000437811 LAMB1P07942 1786 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PTGER2P43116 358 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 EXOSC10Q01780 885 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DIXDC1Q155Q3 683 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DHX32Q7L7V1 743 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 TCEANC2Q96MN5 208 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PSMD1Q99460 953 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CRNKL1Q9BZJ0 848 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CD2APQ9Y5K6 639 aa16.1■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ECE2O60344 883 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PPP4CP60510 307 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 AOC3Q16853 763 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CERS5Q8N5B7 392 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NCOA7Q8NI08 942 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NOL10Q9BSC4 688 aaKnown RBP16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 GAKO14976 1311 aa16.09■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SCN9AQ15858 1988 aa16.08■□□□□ 0.17
HLA-DPA1-243ENST00000437811 BAG3O95817 575 aa16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 FKBP1AP62942 108 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PSME4Q14997 1843 aa16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 Q6ZUG5 572 aa16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 FAM163AQ96GL9 167 aaPredicted RBP16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
HLA-DPA1-243ENST00000437811 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 LARGE1O95461 756 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 AGXT2Q9BYV1 514 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 ATP8A2Q9NTI2 1148 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 BAZ2AQ9UIF9 1905 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-243ENST00000437811 BTDP43251 543 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PPARAQ07869 468 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 TRDNQ13061 729 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 DACT2Q5SW24 774 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 STRIP1Q5VSL9 837 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
HLA-DPA1-243ENST00000437811 FER1L6Q2WGJ9 1857 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 NEDD4P46934 1319 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 DDX60LQ5H9U9 1706 aaKnown RBP16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 MCM5P33992 734 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 ME3Q16798 604 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 FBXL16Q8N461 479 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 LRRC2Q9BYS8 371 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
HLA-DPA1-243ENST00000437811 USP17L3A6NCW0 530 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 USP17L4A6NCW7 530 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PRC1O43663 620 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 PLCG2P16885 1265 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 ANTXR2P58335 489 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 FGD1P98174 961 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 USP17L1Q7RTZ2 530 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 BRF1Q92994 677 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 CNNM2Q9H8M5 875 aa16.04■□□□□ 0.16
HLA-DPA1-243ENST00000437811 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms