RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PDE4CQ08493 712 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 SCARF1Q14162 830 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 WASHC4Q2M389 1173 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 CCDC102BQ68D86 513 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 BOLA2Q9H3K6 86 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 KIAA1468Q9P260 1216 aa8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
LSM3P3-201ENST00000436601 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 XDHP47989 1333 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 ANKRD31Q8N7Z5 1873 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 PHKA1P46020 1223 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 GYG1P46976 350 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 BCAMP50895 628 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 MTMR2Q13614 643 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 CCDC158Q5M9N0 1113 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 GORABQ5T7V8 394 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 TBC1D16Q8TBP0 767 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 FAM84BQ96KN1 310 aaPredicted RBP8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 HAUS7Q99871 368 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 POLLQ9UGP5 575 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 LEMD3Q9Y2U8 911 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 CD2APQ9Y5K6 639 aa8.56□□□□□ -1.04
LSM3P3-201ENST00000436601 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 KCNJ4P48050 445 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 C15orf52Q6ZUT6 534 aaKnown RBP8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 MPNDQ8N594 471 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 TTLL6Q8N841 843 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 RILPL2Q969X0 211 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 EDC3Q96F86 508 aaKnown RBP8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 GPR101Q96P66 508 aaPredicted RBP8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 SLC4A5Q9BY07 1137 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 BACH2Q9BYV9 841 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
LSM3P3-201ENST00000436601 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 C21orf2O43822 256 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 UFL1O94874 794 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 SLC10A3P09131 477 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 UQCRFS1P1P0C7P4 283 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 MCAMP43121 646 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 CAVIN4Q5BKX8 364 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 SWT1Q5T5J6 900 aaKnown RBP8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 DPP8Q6V1X1 898 aaPredicted RBP8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 RETREG2Q8NC44 543 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 EVI5LQ96CN4 794 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 ANTXR1Q9H6X2 564 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 HMG20BQ9P0W2 317 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 PIM2Q9P1W9 311 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
LSM3P3-201ENST00000436601 MYH3P11055 1940 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 GOLIM4O00461 696 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 CDC45O75419 566 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 CHMLP26374 656 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 HIBADHP31937 336 aaKnown RBP8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 ZAP70P43403 619 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 CNTROBQ8N137 903 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 SPATA5Q8NB90 893 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 NLGN2Q8NFZ4 835 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 RTFDC1Q9BY42 306 aaPredicted RBP8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 PAG1Q9NWQ8 432 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 SNED1Q8TER0 1413 aa8.53□□□□□ -1.04
LSM3P3-201ENST00000436601 CYP2E1P05181 493 aaPredicted RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 IRF5Q13568 498 aa8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 DALRD3Q5D0E6 543 aaKnown RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 TDRD7Q8NHU6 1098 aaKnown RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 TMX4Q9H1E5 349 aaPredicted RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 PIH1D3Q9NQM4 214 aaKnown RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 WWC3Q9ULE0 1092 aa8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 IQSEC3Q9UPP2 1182 aaPredicted RBP8.52□□□□□ -1.05
LSM3P3-201ENST00000436601 TAF1P21675 1872 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 MED23Q9ULK4 1368 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 CHGBP05060 677 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
LSM3P3-201ENST00000436601 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms