RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-204ENST00000436439 ALDH1A1P00352 501 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
HMGCL-204ENST00000436439 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 CHD1LQ86WJ1 897 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 OPTNQ96CV9 577 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 PTPN18Q99952 460 aa13.43□□□□□ -0.26
HMGCL-204ENST00000436439 EYA2O00167 538 aa13.42□□□□□ -0.26
HMGCL-204ENST00000436439 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
HMGCL-204ENST00000436439 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
HMGCL-204ENST00000436439 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
HMGCL-204ENST00000436439 FBXO46Q6PJ61 603 aaPredicted RBP13.42□□□□□ -0.26
HMGCL-204ENST00000436439 TBC1D22AQ8WUA7 517 aa13.42□□□□□ -0.26
HMGCL-204ENST00000436439 ZSWIM8A7E2V4 1837 aa13.42□□□□□ -0.26
HMGCL-204ENST00000436439 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
HMGCL-204ENST00000436439 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
HMGCL-204ENST00000436439 TNNI2P48788 182 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 CAP1Q01518 475 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 CRHR2Q13324 411 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
HMGCL-204ENST00000436439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
HMGCL-204ENST00000436439 TEKT1Q969V4 418 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 ZDHHC15Q96MV8 337 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 HTTP42858 3142 aa13.41□□□□□ -0.26
HMGCL-204ENST00000436439 VGLL4Q14135 290 aa13.4□□□□□ -0.26
HMGCL-204ENST00000436439 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
HMGCL-204ENST00000436439 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
HMGCL-204ENST00000436439 SIL1Q9H173 461 aa13.4□□□□□ -0.26
HMGCL-204ENST00000436439 MYH2Q9UKX2 1941 aa13.4□□□□□ -0.27
HMGCL-204ENST00000436439 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
HMGCL-204ENST00000436439 SLC5A1P13866 664 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 BRI3BPQ8WY22 251 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 LPIN2Q92539 896 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 MRIQ9BWK5 157 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 LRRCC1Q9C099 1032 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
HMGCL-204ENST00000436439 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 TRIM17Q9Y577 477 aa13.39□□□□□ -0.27
HMGCL-204ENST00000436439 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
HMGCL-204ENST00000436439 PDE4AP27815 886 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 ERC1Q8IUD2 1116 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-204ENST00000436439 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 MAST3O60307 1309 aa13.38□□□□□ -0.27
HMGCL-204ENST00000436439 CENPFP49454 3210 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 PRDX5P30044 214 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 ZKSCAN4Q969J2 545 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-204ENST00000436439 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 DOCK2Q92608 1830 aa13.37□□□□□ -0.27
HMGCL-204ENST00000436439 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 CIAO1O76071 339 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 SLC34A2O95436 690 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 PHKA1P46020 1223 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 DIXDC1Q155Q3 683 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 CCL15Q16663 113 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 FAM43AQ8N2R8 423 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 TMOD2Q9NZR1 351 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 CSADQ9Y600 493 aa13.36□□□□□ -0.27
HMGCL-204ENST00000436439 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
HMGCL-204ENST00000436439 SPDYE5A6NIY4 337 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 ADORA1P30542 326 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 RGS3P49796 1198 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 SP3Q02447 781 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 G3BP1Q13283 466 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGCL-204ENST00000436439 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 SALL3Q9BXA9 1300 aa13.35□□□□□ -0.27
HMGCL-204ENST00000436439 INPP5BP32019 993 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 GTF2A2P52657 109 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 TCP10Q12799 353 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 NFIAQ12857 509 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 TAF1CQ15572 869 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-204ENST00000436439 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
HMGCL-204ENST00000436439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-204ENST00000436439 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms