RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 SLC10A5Q5PT55 438 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 BCL2L13Q9BXK5 485 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 H7C1D1 291 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 WFS1O76024 890 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 HUNKP57058 714 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 DPP8Q6V1X1 898 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 RRP7AQ9Y3A4 280 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 LAMB4A4D0S4 1761 aa11.1□□□□□ -0.63
NIF3L1-208ENST00000436412 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 NR5A1Q13285 461 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 DPF2Q92785 391 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 ZFP42Q96MM3 310 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 CNOT7Q9UIV1 285 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-208ENST00000436412 CEP290O15078 2479 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 TERTO14746 1132 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 EIF4A1P60842 406 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 NR6A1Q15406 480 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 TRPM4Q8TD43 1214 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 UTP14AQ9BVJ6 771 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 MAP4K5Q9Y4K4 846 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 ABCC4O15439 1325 aa11.08□□□□□ -0.64
NIF3L1-208ENST00000436412 RAD17O75943 681 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 NEFMP07197 916 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 MYL6BP14649 208 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 RGMBQ6NW40 437 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 MRPL14Q6P1L8 145 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 USP48Q86UV5 1035 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 POLR2AP24928 1970 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-208ENST00000436412 AKAP11Q9UKA4 1901 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 FAM155AB1AL88 458 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 RPS12P25398 132 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 CNGB1Q14028 1251 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 KRT26Q7Z3Y9 468 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 FKBPLQ9UIM3 349 aa11.06□□□□□ -0.64
NIF3L1-208ENST00000436412 ZNF157P51786 506 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 KIF23Q02241 960 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 GRAPQ13588 217 aa11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 DCPSQ96C86 337 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 RNF186Q9NXI6 227 aa11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
NIF3L1-208ENST00000436412 KIAA0100Q14667 2235 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 YDJCA8MPS7 323 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 TRPA1O75762 1119 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 AP1G2O75843 785 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 SOX10P56693 466 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 CTU1Q7Z7A3 348 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 GOPCQ9HD26 462 aa11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-208ENST00000436412 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 FSHRP23945 695 aa11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 RFC5P40937 340 aa11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 PKN2Q16513 984 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-208ENST00000436412 SHTN1A0MZ66 631 aa11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 PSMD14O00487 310 aa11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 HCLS1P14317 486 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 NLRP10Q86W26 655 aa11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
NIF3L1-208ENST00000436412 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 FKBP1BP68106 108 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 TBC1D10BQ4KMP7 808 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 EYA3Q99504 573 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms