RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 BAZ2AQ9UIF9 1905 aaKnown RBP27.48■■□□□ 1.99
CPSF4-204ENST00000436336 BTDP43251 543 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 EIF6P56537 245 aaKnown RBP27.48■■□□□ 1.99
CPSF4-204ENST00000436336 RNF20Q5VTR2 975 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 AGBL3Q8NEM8 1001 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 KCNB2Q92953 911 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 GMLQ99445 158 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 CTNNA3Q9UI47 895 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 DAGLAQ9Y4D2 1042 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 ZMYM6O95789 1325 aa27.48■■□□□ 1.99
CPSF4-204ENST00000436336 APPP05067 770 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 SCNN1DP51172 638 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 CREB3L3Q68CJ9 461 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 CRNKL1Q9BZJ0 848 aaKnown RBP27.47■■□□□ 1.99
CPSF4-204ENST00000436336 PALD1Q9ULE6 856 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 GSG1L2A8MUP6 293 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 FGAP02671 866 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 PLCG2P16885 1265 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 CRKP46108 304 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 ALX1Q15699 326 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 GPR162Q16538 588 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 IL17RAQ96F46 866 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 SERPINA10Q9UK55 444 aa27.47■■□□□ 1.99
CPSF4-204ENST00000436336 NAV1Q8NEY1 1877 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 SLC27A2O14975 620 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 PRKAB2O43741 272 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 IFNL3Q8IZI9 196 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 KIF2CQ99661 725 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 NACAP1Q9BZK3 213 aa27.46■■□□□ 1.99
CPSF4-204ENST00000436336 ZKSCAN1P17029 563 aaPredicted RBP27.45■■□□□ 1.99
CPSF4-204ENST00000436336 SDR42E1Q8WUS8 393 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 ZDHHC15Q96MV8 337 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 EPB41L4AQ9HCS5 686 aaPredicted RBP27.44■■□□□ 1.98
CPSF4-204ENST00000436336 HDAC9Q9UKV0 1011 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 ZBTB12Q9Y330 459 aaPredicted RBP27.44■■□□□ 1.98
CPSF4-204ENST00000436336 SNX14Q9Y5W7 946 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 LAMB1P07942 1786 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 GIMAP6Q6P9H5 292 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 SH3RF3Q8TEJ3 882 aaPredicted RBP27.44■■□□□ 1.98
CPSF4-204ENST00000436336 NAPBQ9H115 298 aa27.44■■□□□ 1.98
CPSF4-204ENST00000436336 GRIN3BO60391 1043 aa27.43■■□□□ 1.98
CPSF4-204ENST00000436336 RPS12P25398 132 aaKnown RBP27.43■■□□□ 1.98
CPSF4-204ENST00000436336 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
CPSF4-204ENST00000436336 ATP8A2Q9NTI2 1148 aa27.43■■□□□ 1.98
CPSF4-204ENST00000436336 CYP21A2P08686 494 aa27.42■■□□□ 1.98
CPSF4-204ENST00000436336 IMMTQ16891 758 aaKnown RBP27.42■■□□□ 1.98
CPSF4-204ENST00000436336 TSGA10IPQ3SY00 556 aa27.42■■□□□ 1.98
CPSF4-204ENST00000436336 OGFOD1Q8N543 542 aa27.42■■□□□ 1.98
CPSF4-204ENST00000436336 MYH1P12882 1939 aa27.42■■□□□ 1.98
CPSF4-204ENST00000436336 TDO2P48775 406 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 MMP14P50281 582 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 RHBDL3P58872 404 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 USP17L8P0C7I0 530 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 ANP32AP39687 249 aaKnown RBP27.41■■□□□ 1.98
CPSF4-204ENST00000436336 APOBEC3HQ6NTF7 200 aaKnown RBP27.41■■□□□ 1.98
CPSF4-204ENST00000436336 DDRGK1Q96HY6 314 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 RNF181Q9P0P0 153 aa27.41■■□□□ 1.98
CPSF4-204ENST00000436336 ZNF541Q9H0D2 1346 aa27.4■■□□□ 1.98
CPSF4-204ENST00000436336 RBM5P52756 815 aaKnown RBP eCLIP27.4■■□□□ 1.983e-9■□□□□ 10.6
CPSF4-204ENST00000436336 DDX60LQ5H9U9 1706 aaKnown RBP27.4■■□□□ 1.98
CPSF4-204ENST00000436336 ZNF213O14771 459 aa27.39■■□□□ 1.98
CPSF4-204ENST00000436336 USP5P45974 858 aa27.39■■□□□ 1.98
CPSF4-204ENST00000436336 RABEP1Q15276 862 aa27.39■■□□□ 1.98
CPSF4-204ENST00000436336 TEX11Q8IYF3 940 aa27.39■■□□□ 1.98
CPSF4-204ENST00000436336 DCP1AQ9NPI6 582 aaPredicted RBP27.39■■□□□ 1.98
CPSF4-204ENST00000436336 KRT32Q14532 448 aa27.38■■□□□ 1.97
CPSF4-204ENST00000436336 CFAP100Q494V2 611 aa27.38■■□□□ 1.97
CPSF4-204ENST00000436336 GJA3Q9Y6H8 435 aa27.38■■□□□ 1.97
CPSF4-204ENST00000436336 SRCAPQ6ZRS2 3230 aa27.38■■□□□ 1.97
CPSF4-204ENST00000436336 DPF2Q92785 391 aa27.38■■□□□ 1.97
CPSF4-204ENST00000436336 C9orf131Q5VYM1 1079 aa27.37■■□□□ 1.97
CPSF4-204ENST00000436336 CDC42EP5Q6NZY7 148 aa27.37■■□□□ 1.97
CPSF4-204ENST00000436336 TGFBRAP1Q8WUH2 860 aa27.37■■□□□ 1.97
CPSF4-204ENST00000436336 USP40Q9NVE5 1235 aa27.37■■□□□ 1.97
CPSF4-204ENST00000436336 MKRN1Q9UHC7 482 aaKnown RBP27.37■■□□□ 1.97
CPSF4-204ENST00000436336 GPC2Q8N158 579 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 TM6SF1Q9BZW5 370 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 TAF6LQ9Y6J9 622 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 HAND2P61296 217 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 MTMR14Q8NCE2 650 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 PCDHAC2Q9Y5I4 1007 aa27.36■■□□□ 1.97
CPSF4-204ENST00000436336 PSMA5P28066 241 aa27.35■■□□□ 1.97
CPSF4-204ENST00000436336 GMPSP49915 693 aaPredicted RBP27.35■■□□□ 1.97
CPSF4-204ENST00000436336 ADCK5Q3MIX3 580 aa27.35■■□□□ 1.97
CPSF4-204ENST00000436336 ARPP21Q9UBL0 812 aaPredicted RBP27.35■■□□□ 1.97
CPSF4-204ENST00000436336 ZNF280AP59817 542 aaPredicted RBP27.34■■□□□ 1.97
CPSF4-204ENST00000436336 DLGAP5Q15398 846 aa27.34■■□□□ 1.97
CPSF4-204ENST00000436336 SBK1Q52WX2 424 aa27.34■■□□□ 1.97
CPSF4-204ENST00000436336 IL27Q8NEV9 243 aa27.34■■□□□ 1.97
CPSF4-204ENST00000436336 JAKMIP1Q96N16 626 aaKnown RBP27.34■■□□□ 1.97
CPSF4-204ENST00000436336 SPDYE2BA6NHP3 402 aa27.33■■□□□ 1.97
CPSF4-204ENST00000436336 SPDYE6P0CI01 402 aa27.33■■□□□ 1.97
CPSF4-204ENST00000436336 CTR9Q6PD62 1173 aa27.33■■□□□ 1.97
CPSF4-204ENST00000436336 MAPKAPK5Q8IW41 473 aa27.33■■□□□ 1.97
CPSF4-204ENST00000436336 PRMT6Q96LA8 375 aaPredicted RBP27.33■■□□□ 1.97
CPSF4-204ENST00000436336 FLT1P17948 1338 aa27.33■■□□□ 1.97
CPSF4-204ENST00000436336 E7EWF7 191 aa27.33■■□□□ 1.96
CPSF4-204ENST00000436336 WDHD1O75717 1129 aaPredicted RBP27.33■■□□□ 1.96
CPSF4-204ENST00000436336 MCM9Q9NXL9 1143 aa27.33■■□□□ 1.96
CPSF4-204ENST00000436336 ANAPC4Q9UJX5 808 aa27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms