RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 PDS5AQ29RF7 1337 aaKnown RBP22.53■■□□□ 1.2
HMGN1-207ENST00000436324 ARID4AP29374 1257 aaPredicted RBP22.52■■□□□ 1.2
HMGN1-207ENST00000436324 TTC39AQ5SRH9 613 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 FKBP1CQ5VVH2 108 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 ERICH6Q7L0X2 663 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 FAM83AQ86UY5 434 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 ANKRD13AQ8IZ07 590 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 WNK4Q96J92 1243 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 ELP3Q9H9T3 547 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 SNRKQ9NRH2 765 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 DDX19BQ9UMR2 479 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 EXOC6BQ9Y2D4 811 aa22.52■■□□□ 1.2
HMGN1-207ENST00000436324 UQCRFS1P1P0C7P4 283 aa22.51■■□□□ 1.19
HMGN1-207ENST00000436324 MCAMP43121 646 aa22.51■■□□□ 1.19
HMGN1-207ENST00000436324 NFIAQ12857 509 aa22.51■■□□□ 1.19
HMGN1-207ENST00000436324 C20orf194Q5TEA3 1177 aa22.51■■□□□ 1.19
HMGN1-207ENST00000436324 CCDC8Q9H0W5 538 aaPredicted RBP22.51■■□□□ 1.19
HMGN1-207ENST00000436324 TM4SF4P48230 202 aa22.5■■□□□ 1.19
HMGN1-207ENST00000436324 MECOMQ03112 1051 aa22.5■■□□□ 1.19
HMGN1-207ENST00000436324 SREBF2Q12772 1141 aa22.5■■□□□ 1.19
HMGN1-207ENST00000436324 CCDC158Q5M9N0 1113 aa22.5■■□□□ 1.19
HMGN1-207ENST00000436324 UNCXA6NJT0 531 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 TBC1D8O95759 1140 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 GJA5P36382 358 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 MAP3K9P80192 1104 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.49■■□□□ 1.19
HMGN1-207ENST00000436324 MIGA2Q7L4E1 593 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 SLF2Q8IX21 1173 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 FAM151AQ8WW52 585 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 ZBTB40Q9NUA8 1239 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 TLR7Q9NYK1 1049 aaKnown RBP22.49■■□□□ 1.19
HMGN1-207ENST00000436324 RAI14Q9P0K7 980 aa22.49■■□□□ 1.19
HMGN1-207ENST00000436324 ZFPM1Q8IX07 1006 aa22.48■■□□□ 1.19
HMGN1-207ENST00000436324 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-207ENST00000436324 EAF2Q96CJ1 260 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-207ENST00000436324 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
HMGN1-207ENST00000436324 FAM198AQ9UFP1 575 aa22.48■■□□□ 1.19
HMGN1-207ENST00000436324 GAKO14976 1311 aa22.48■■□□□ 1.19
HMGN1-207ENST00000436324 MANSC4A6NHS7 340 aaPredicted RBP22.47■■□□□ 1.19
HMGN1-207ENST00000436324 APBB1O00213 710 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 ZBTB48P10074 688 aaPredicted RBP22.47■■□□□ 1.19
HMGN1-207ENST00000436324 BTDP43251 543 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 VGLL4Q14135 290 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.19
HMGN1-207ENST00000436324 CNKSR2Q8WXI2 1034 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 OPTNQ96CV9 577 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 HOOK2Q96ED9 719 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
HMGN1-207ENST00000436324 LRP2BPQ9P2M1 347 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 DBNLQ9UJU6 430 aaKnown RBP22.47■■□□□ 1.19
HMGN1-207ENST00000436324 CSADQ9Y600 493 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 MROH7-TTC4A0A0A0MT08 1334 aa22.47■■□□□ 1.19
HMGN1-207ENST00000436324 ERC1Q8IUD2 1116 aa22.46■■□□□ 1.19
HMGN1-207ENST00000436324 RPAP2Q8IXW5 612 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-207ENST00000436324 ZNF384Q8TF68 577 aa22.46■■□□□ 1.19
HMGN1-207ENST00000436324 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-207ENST00000436324 WRNIP1Q96S55 665 aa22.46■■□□□ 1.19
HMGN1-207ENST00000436324 AKAP11Q9UKA4 1901 aa22.46■■□□□ 1.19
HMGN1-207ENST00000436324 CASP8AP2Q9UKL3 1982 aa22.45■■□□□ 1.18
HMGN1-207ENST00000436324 RGS3P49796 1198 aa22.45■■□□□ 1.18
HMGN1-207ENST00000436324 DCAF15Q66K64 600 aa22.45■■□□□ 1.18
HMGN1-207ENST00000436324 SIRT2Q8IXJ6 389 aa22.45■■□□□ 1.18
HMGN1-207ENST00000436324 NSUN4Q96CB9 384 aaKnown RBP22.45■■□□□ 1.18
HMGN1-207ENST00000436324 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
HMGN1-207ENST00000436324 IL1RAPL2Q9NP60 686 aa22.45■■□□□ 1.18
HMGN1-207ENST00000436324 HMMRO75330 724 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 GSTO1P78417 241 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 PICALMQ13492 652 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 PDE3AQ14432 1141 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 HSP90AB4PQ58FF6 505 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 AACSQ86V21 672 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 ZKSCAN4Q969J2 545 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-207ENST00000436324 RPAP1Q9BWH6 1393 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-207ENST00000436324 ZNF341Q9BYN7 854 aa22.44■■□□□ 1.18
HMGN1-207ENST00000436324 MYH2Q9UKX2 1941 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 LDHCP07864 332 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 ZAP70P43403 619 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 INHBEP58166 350 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 DGKZQ13574 1117 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 IFNL1Q8IU54 200 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 RHPN1Q8TCX5 695 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 OTUD5Q96G74 571 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 ABHD8Q96I13 439 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 R3HDMLQ9H3Y0 253 aa22.43■■□□□ 1.18
HMGN1-207ENST00000436324 GPR75-ASB3A0A0A6YYF3 556 aa22.42■■□□□ 1.18
HMGN1-207ENST00000436324 WDHD1O75717 1129 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-207ENST00000436324 CYP2E1P05181 493 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-207ENST00000436324 ZSCAN29Q8IWY8 852 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-207ENST00000436324 IDI2Q9BXS1 227 aa22.42■■□□□ 1.18
HMGN1-207ENST00000436324 MCOLN1Q9GZU1 580 aa22.42■■□□□ 1.18
HMGN1-207ENST00000436324 DDX4Q9NQI0 724 aaKnown RBP22.42■■□□□ 1.18
HMGN1-207ENST00000436324 SNCAIPQ9Y6H5 919 aa22.42■■□□□ 1.18
HMGN1-207ENST00000436324 IGF2BP3O00425 579 aaKnown RBP eCLIP22.41■■□□□ 1.18
HMGN1-207ENST00000436324 ENTPD3O75355 529 aa22.41■■□□□ 1.18
HMGN1-207ENST00000436324 INPP5BP32019 993 aa22.41■■□□□ 1.18
HMGN1-207ENST00000436324 ZNF512BQ96KM6 892 aaPredicted RBP22.41■■□□□ 1.18
HMGN1-207ENST00000436324 OTOFQ9HC10 1997 aa22.41■■□□□ 1.18
HMGN1-207ENST00000436324 RHBDL3P58872 404 aa22.4■■□□□ 1.18
HMGN1-207ENST00000436324 NAA16Q6N069 864 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-207ENST00000436324 SH3BP5LQ7L8J4 393 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms