RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
VPS50-203ENST00000436177 ANKRD13AQ8IZ07 590 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 TDRD7Q8NHU6 1098 aaKnown RBP9.72□□□□□ -0.85
VPS50-203ENST00000436177 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
VPS50-203ENST00000436177 WNK4Q96J92 1243 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 PRMT6Q96LA8 375 aaPredicted RBP9.72□□□□□ -0.85
VPS50-203ENST00000436177 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 CSADQ9Y600 493 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 CACNA1FO60840 1977 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 IFIT1P09914 478 aaKnown RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 CRKP46108 304 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 MAP3K11Q16584 847 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 NBPF12Q5TAG4 269 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 FBXO46Q6PJ61 603 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 DZIP1LQ8IYY4 767 aaKnown RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 TEKT1Q969V4 418 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 HOOK2Q96ED9 719 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 PUS3Q9BZE2 481 aaKnown RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 ZNF70Q9UC06 446 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
VPS50-203ENST00000436177 PCDHAC2Q9Y5I4 1007 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 MAST3O60307 1309 aa9.71□□□□□ -0.86
VPS50-203ENST00000436177 TCP10L2B9ZVM9 353 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
VPS50-203ENST00000436177 ERO1AQ96HE7 468 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 CFHR5Q9BXR6 569 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 TDRD3Q9H7E2 651 aaKnown RBP9.7□□□□□ -0.86
VPS50-203ENST00000436177 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 UTYO14607 1347 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 SSC5DA1L4H1 1573 aa9.7□□□□□ -0.86
VPS50-203ENST00000436177 PDE8BO95263 885 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
VPS50-203ENST00000436177 SLC5A1P13866 664 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 RABL6Q3YEC7 729 aaPredicted RBP9.69□□□□□ -0.86
VPS50-203ENST00000436177 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
VPS50-203ENST00000436177 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 ELP3Q9H9T3 547 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 TRIM17Q9Y577 477 aa9.69□□□□□ -0.86
VPS50-203ENST00000436177 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS50-203ENST00000436177 GTF2A2P52657 109 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 HDLBPQ00341 1268 aaKnown RBP9.68□□□□□ -0.86
VPS50-203ENST00000436177 LRRC24Q50LG9 513 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 FBXO33Q7Z6M2 555 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 TMEM39BQ9GZU3 492 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 GNL3LQ9NVN8 582 aaKnown RBP9.68□□□□□ -0.86
VPS50-203ENST00000436177 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
VPS50-203ENST00000436177 AOX1Q06278 1338 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 CCL15-CCL14A0A0B4J2E2 113 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 C2orf72A6NCS6 295 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 EYA2O00167 538 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 USP2O75604 605 aaPredicted RBP9.67□□□□□ -0.86
VPS50-203ENST00000436177 BCAMP50895 628 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 CRHR2Q13324 411 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 TAF1CQ15572 869 aaPredicted RBP9.67□□□□□ -0.86
VPS50-203ENST00000436177 CCL15Q16663 113 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 WDR66Q8TBY9 1149 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 LPIN2Q92539 896 aa9.67□□□□□ -0.86
VPS50-203ENST00000436177 ZNF646O15015 1829 aaPredicted RBP9.67□□□□□ -0.86
VPS50-203ENST00000436177 CACNB3P54284 484 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 SP3Q02447 781 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 VGLL4Q14135 290 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 ATP2B3Q16720 1220 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
VPS50-203ENST00000436177 INTS3Q68E01 1043 aaKnown RBP9.66□□□□□ -0.86
VPS50-203ENST00000436177 OTOP1Q7RTM1 612 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 WRNIP1Q96S55 665 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 API5Q9BZZ5 524 aaKnown RBP9.66□□□□□ -0.86
VPS50-203ENST00000436177 USP44Q9H0E7 712 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 SIL1Q9H173 461 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 CEP126Q9P2H0 1117 aa9.66□□□□□ -0.86
VPS50-203ENST00000436177 SLC34A2O95436 690 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 CT47B1P0C2W7 299 aaPredicted RBP9.65□□□□□ -0.86
VPS50-203ENST00000436177 CETPP11597 493 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 GJA5P36382 358 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 SLFN5Q08AF3 891 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 KIF22Q14807 665 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms