RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FAM76AQ8TAV0 307 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 PCDHA5Q9Y5H7 936 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 GOLIM4O00461 696 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 STIM1Q13586 685 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 CWF19L2Q2TBE0 894 aaKnown RBP8.49□□□□□ -1.05
CPSF6-202ENST00000435070 STOX1Q6ZVD7 989 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 ABCC1P33527 1531 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 ATP7BP35670 1465 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 SHTN1A0MZ66 631 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 HIP1O00291 1037 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 STX17P56962 302 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 KRT32Q14532 448 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 OTUD6BQ8N6M0 293 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 SAMSN1Q9NSI8 373 aaKnown RBP8.49□□□□□ -1.05
CPSF6-202ENST00000435070 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPSF6-202ENST00000435070 DLG5Q8TDM6 1919 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 GOLGA6CA6NDK9 693 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 IKBKBO14920 756 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 GOLGA6DP0CG33 693 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 PAX7P23759 505 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 AMPHP49418 695 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 DDX46Q7L014 1031 aaKnown RBP8.49□□□□□ -1.05
CPSF6-202ENST00000435070 MSANTD4Q8NCY6 345 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 SMARCC2Q8TAQ2 1214 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 BPIFA3Q9BQP9 254 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 GOLGA6AQ9NYA3 693 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 CHPF2Q9P2E5 772 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 TEX33O43247 280 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 COBLO75128 1261 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 KIAA0754O94854 1291 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 RTEL1Q9NZ71 1219 aa8.49□□□□□ -1.05
CPSF6-202ENST00000435070 CRB1P82279 1406 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 USP5P45974 858 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 BIRC2Q13490 618 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 CTCFLQ8NI51 663 aaPredicted RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 PFKFB2O60825 505 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 SRGAP2O75044 1071 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 CCDC148Q8NFR7 591 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 HDAC6Q9UBN7 1215 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NPHP4O75161 1426 aaPredicted RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NEDD4P46934 1319 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NDUFAB1O14561 156 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 ATP1A2P50993 1020 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NAIF1Q69YI7 327 aaPredicted RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 KIF1CO43896 1103 aaKnown RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 SASH1O94885 1247 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 A0A1W2PQ27 194 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 A0A1W2PQ64 194 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 A0A1W2PQD8 194 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 CCDC189A1A4V9 331 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 SKAP2O75563 359 aaPredicted RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 NF2P35240 595 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 FOXP4Q8IVH2 680 aaPredicted RBP8.48□□□□□ -1.05
CPSF6-202ENST00000435070 CABS1Q96KC9 395 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 GUCA1BQ9UMX6 200 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 ADGRL3Q9HAR2 1447 aa8.48□□□□□ -1.05
CPSF6-202ENST00000435070 AKR1B15C9JRZ8 316 aaPredicted RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ZCCHC11Q5TAX3 1644 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 MAP9Q49MG5 647 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 GRAMD1CQ8IYS0 662 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 AIFM3Q96NN9 605 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 CDHR2Q9BYE9 1310 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 CPLX1O14810 134 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 HAND2P61296 217 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 FMR1Q06787 632 aaKnown RBP eCLIP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 PDCLQ13371 301 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 DHX32Q7L7V1 743 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 NAPGQ99747 312 aaPredicted RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 CAPS2Q9BXY5 557 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 HOOK1Q9UJC3 728 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ZFYVE16Q7Z3T8 1539 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ELF1P32519 619 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 RBL2Q08999 1139 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 E2F5Q15329 346 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 SLF1Q9BQI6 1058 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 TRIM10Q9UDY6 481 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ODF2LQ9ULJ1 636 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ZC3H13Q5T200 1668 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 ATP2C2O75185 946 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 PRPF6O94906 941 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 FDPSP14324 419 aaKnown RBP8.47□□□□□ -1.05
CPSF6-202ENST00000435070 KCTD16Q68DU8 428 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 HPCAL4Q9UM19 191 aa8.47□□□□□ -1.05
CPSF6-202ENST00000435070 VEZTQ9HBM0 779 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms