RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 KRT32Q14532 448 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 ALX1Q15699 326 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
PCOTH-203ENST00000435039 USP17L3A6NCW0 530 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 USP17L4A6NCW7 530 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 BECN1Q14457 450 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 GRIK5Q16478 980 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 DACT2Q5SW24 774 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 USP17L1Q7RTZ2 530 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 SNX21Q969T3 373 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
PCOTH-203ENST00000435039 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
PCOTH-203ENST00000435039 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
PCOTH-203ENST00000435039 ZNF277Q9NRM2 450 aaPredicted RBP13.52□□□□□ -0.25
PCOTH-203ENST00000435039 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 ST18O60284 1047 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
PCOTH-203ENST00000435039 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 KLRG1Q96E93 195 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
PCOTH-203ENST00000435039 NACAP1Q9BZK3 213 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 EPB41L4AQ9HCS5 686 aaPredicted RBP13.51□□□□□ -0.25
PCOTH-203ENST00000435039 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
PCOTH-203ENST00000435039 YDJCA8MPS7 323 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
PCOTH-203ENST00000435039 BAG3O95817 575 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 CYP21A2P08686 494 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 PLCG2P16885 1265 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 PPP4CP60510 307 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 DIXDC1Q155Q3 683 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 CRNKL1Q9BZJ0 848 aaKnown RBP13.5□□□□□ -0.25
PCOTH-203ENST00000435039 NAPBQ9H115 298 aa13.5□□□□□ -0.25
PCOTH-203ENST00000435039 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCOTH-203ENST00000435039 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
PCOTH-203ENST00000435039 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 GSG1L2A8MUP6 293 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 FGAP02671 866 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
PCOTH-203ENST00000435039 PSMA5P28066 241 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 TDO2P48775 406 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
PCOTH-203ENST00000435039 HDLBPQ00341 1268 aaKnown RBP13.49□□□□□ -0.25
PCOTH-203ENST00000435039 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
PCOTH-203ENST00000435039 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
PCOTH-203ENST00000435039 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
PCOTH-203ENST00000435039 APPP05067 770 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 CASTP20810 708 aaKnown RBP13.48□□□□□ -0.25
PCOTH-203ENST00000435039 BTDP43251 543 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 TEKT1Q969V4 418 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 ATP8A2Q9NTI2 1148 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
PCOTH-203ENST00000435039 POTECB2RU33 542 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 ZNF213O14771 459 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 PRKAB2O43741 272 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
PCOTH-203ENST00000435039 MCM2P49736 904 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 RSBN1LQ6PCB5 846 aaPredicted RBP13.47□□□□□ -0.25
PCOTH-203ENST00000435039 SDR42E1Q8WUS8 393 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
PCOTH-203ENST00000435039 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 CYP46A1Q9Y6A2 500 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 TAF6LQ9Y6J9 622 aa13.47□□□□□ -0.25
PCOTH-203ENST00000435039 ROBO3Q96MS0 1386 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 E7EWF7 191 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
PCOTH-203ENST00000435039 NEK4P51957 841 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 RUFY3Q7L099 469 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 SH3RF3Q8TEJ3 882 aaPredicted RBP13.46□□□□□ -0.25
PCOTH-203ENST00000435039 ZDHHC15Q96MV8 337 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 TTC14Q96N46 770 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
PCOTH-203ENST00000435039 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
PCOTH-203ENST00000435039 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 ANAPC4Q9UJX5 808 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 MYH1P12882 1939 aa13.46□□□□□ -0.25
PCOTH-203ENST00000435039 F8W031 263 aaPredicted RBP13.45□□□□□ -0.26
PCOTH-203ENST00000435039 K7ELQ4 463 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms