RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 SGSM2O43147 1006 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
LINC00339-204ENST00000434233 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 BTDP43251 543 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
LINC00339-204ENST00000434233 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 ADARB2Q9NS39 739 aaKnown RBP14.8□□□□□ -0.04
LINC00339-204ENST00000434233 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00339-204ENST00000434233 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 SCN4AP35499 1836 aa14.8□□□□□ -0.04
LINC00339-204ENST00000434233 POTECB2RU33 542 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 WNT10BO00744 389 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 GPAA1O43292 621 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 GNAT2P19087 354 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
LINC00339-204ENST00000434233 RBM26Q5T8P6 1007 aaKnown RBP14.79□□□□□ -0.04
LINC00339-204ENST00000434233 SAMD7Q7Z3H4 446 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 PCDHAC2Q9Y5I4 1007 aa14.79□□□□□ -0.04
LINC00339-204ENST00000434233 CCDC171Q6TFL3 1326 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 PATL2C9JE40 543 aaKnown RBP14.78□□□□□ -0.04
LINC00339-204ENST00000434233 MYO1BO43795 1136 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 MBD4O95243 580 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 RHBDL3P58872 404 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 KIF4BQ2VIQ3 1234 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 CDC42EP5Q6NZY7 148 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 USP50Q70EL3 339 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-204ENST00000434233 LCORLQ8N3X6 602 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 ARMT1Q9H993 441 aa14.78□□□□□ -0.04
LINC00339-204ENST00000434233 RPAP1Q9BWH6 1393 aaPredicted RBP14.77□□□□□ -0.04
LINC00339-204ENST00000434233 VEGFAP15692 232 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 EPHX2P34913 555 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 NBPF9Q3BBW0 867 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 C8orf34Q49A92 452 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 TBC1D10BQ4KMP7 808 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 IL25Q9H293 177 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 TDRD3Q9H7E2 651 aaKnown RBP14.77□□□□□ -0.05
LINC00339-204ENST00000434233 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.05
LINC00339-204ENST00000434233 EGFRP00533 1210 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-204ENST00000434233 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 FKBP1CQ5VVH2 108 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 GIMAP6Q6P9H5 292 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-204ENST00000434233 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 IDI2Q9BXS1 227 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 TAF1DQ9H5J8 278 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-204ENST00000434233 RRAGCQ9HB90 399 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
LINC00339-204ENST00000434233 ZNF70Q9UC06 446 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-204ENST00000434233 GSG1L2A8MUP6 293 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 EPB41L2O43491 1005 aaKnown RBP14.75□□□□□ -0.05
LINC00339-204ENST00000434233 HSPD1P10809 573 aaKnown RBP14.75□□□□□ -0.05
LINC00339-204ENST00000434233 ALX1Q15699 326 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 TRPM4Q8TD43 1214 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 ZC3H15Q8WU90 426 aaKnown RBP14.75□□□□□ -0.05
LINC00339-204ENST00000434233 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 DSCC1Q9BVC3 393 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 TMOD2Q9NZR1 351 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 ECM29Q5VYK3 1845 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 ADAMTSL1Q8N6G6 1762 aa14.75□□□□□ -0.05
LINC00339-204ENST00000434233 PRKAB2O43741 272 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
LINC00339-204ENST00000434233 REC8O95072 547 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 USP5P45974 858 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 IFNL3Q8IZI9 196 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 MAP4K1Q92918 833 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 NACAP1Q9BZK3 213 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
LINC00339-204ENST00000434233 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
LINC00339-204ENST00000434233 CLRN2A0PK11 232 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 ENTPD3O75355 529 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 APPP05067 770 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 PTH1RQ03431 593 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 SDR42E1Q8WUS8 393 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 DDRGK1Q96HY6 314 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 BACH2Q9BYV9 841 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 LSG1Q9H089 658 aaKnown RBP14.73□□□□□ -0.05
LINC00339-204ENST00000434233 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
LINC00339-204ENST00000434233 CDK5RAP2Q96SN8 1893 aa14.73□□□□□ -0.05
LINC00339-204ENST00000434233 PITPNM2Q9BZ72 1349 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 FOXP2O15409 715 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 FGAP02671 866 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 TNNI2P48788 182 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 TNFAIP1Q13829 316 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 ANO2Q9NQ90 1003 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 FAM198AQ9UFP1 575 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 UTRNP46939 3433 aa14.72□□□□□ -0.05
LINC00339-204ENST00000434233 POLR2AP24928 1970 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms