RNA–Protein interactions for RNA: ENST00000433619.2

FAM3A-211, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-211ENST00000433619 CACNB3P54284 484 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 MAP2K1Q02750 393 aaPredicted RBP23.55■■□□□ 1.36
FAM3A-211ENST00000433619 NOGQ13253 232 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 LDLRAD1Q5T700 205 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 ZNF384Q8TF68 577 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 NSUN4Q96CB9 384 aaKnown RBP23.55■■□□□ 1.36
FAM3A-211ENST00000433619 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 TMEM39BQ9GZU3 492 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 USP40Q9NVE5 1235 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 PCDHB15Q9Y5E8 787 aa23.55■■□□□ 1.36
FAM3A-211ENST00000433619 LDHCP07864 332 aa23.54■■□□□ 1.36
FAM3A-211ENST00000433619 GSTO1P78417 241 aa23.54■■□□□ 1.36
FAM3A-211ENST00000433619 PRKG1Q13976 671 aa23.54■■□□□ 1.36
FAM3A-211ENST00000433619 LRP2BPQ9P2M1 347 aa23.54■■□□□ 1.36
FAM3A-211ENST00000433619 ANGEL1Q9UNK9 670 aaKnown RBP23.54■■□□□ 1.36
FAM3A-211ENST00000433619 PCNTO95613 3336 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 MYH2Q9UKX2 1941 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 GPR75-ASB3A0A0A6YYF3 556 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 UNCXA6NJT0 531 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 ZAP70P43403 619 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 RAI14Q9P0K7 980 aa23.53■■□□□ 1.36
FAM3A-211ENST00000433619 SSC5DA1L4H1 1573 aa23.52■■□□□ 1.36
FAM3A-211ENST00000433619 THSD7BQ9C0I4 1608 aa23.52■■□□□ 1.36
FAM3A-211ENST00000433619 USP2O75604 605 aaPredicted RBP23.52■■□□□ 1.36
FAM3A-211ENST00000433619 SLC10A3P09131 477 aa23.52■■□□□ 1.36
FAM3A-211ENST00000433619 IFIT2P09913 472 aaKnown RBP23.52■■□□□ 1.36
FAM3A-211ENST00000433619 LRRCC1Q9C099 1032 aa23.52■■□□□ 1.36
FAM3A-211ENST00000433619 MROH7-TTC4A0A0A0MT08 1334 aa23.52■■□□□ 1.36
FAM3A-211ENST00000433619 RASAL3Q86YV0 1011 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 CDAN1Q8IWY9 1227 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 FAM151AQ8WW52 585 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 ZIC5Q96T25 663 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 IDI2Q9BXS1 227 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 FZD1Q9UP38 647 aa23.51■■□□□ 1.35
FAM3A-211ENST00000433619 AAMPQ13685 434 aa23.5■■□□□ 1.35
FAM3A-211ENST00000433619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.5■■□□□ 1.35
FAM3A-211ENST00000433619 FAM198AQ9UFP1 575 aa23.5■■□□□ 1.35
FAM3A-211ENST00000433619 MAP4K4O95819 1239 aaPredicted RBP23.49■■□□□ 1.35
FAM3A-211ENST00000433619 BTDP43251 543 aa23.49■■□□□ 1.35
FAM3A-211ENST00000433619 IREB2P48200 963 aaKnown RBP23.49■■□□□ 1.35
FAM3A-211ENST00000433619 NFIAQ12857 509 aa23.49■■□□□ 1.35
FAM3A-211ENST00000433619 HOOK2Q96ED9 719 aa23.49■■□□□ 1.35
FAM3A-211ENST00000433619 PIH1D3Q9NQM4 214 aaKnown RBP23.49■■□□□ 1.35
FAM3A-211ENST00000433619 RHBDL3P58872 404 aa23.48■■□□□ 1.35
FAM3A-211ENST00000433619 KIF23Q02241 960 aaPredicted RBP23.48■■□□□ 1.35
FAM3A-211ENST00000433619 AIDAQ96BJ3 306 aa23.48■■□□□ 1.35
FAM3A-211ENST00000433619 RPAP1Q9BWH6 1393 aaPredicted RBP23.48■■□□□ 1.35
FAM3A-211ENST00000433619 FOXN1O15353 648 aa23.47■■□□□ 1.35
FAM3A-211ENST00000433619 ENTPD3O75355 529 aa23.47■■□□□ 1.35
FAM3A-211ENST00000433619 TCP10Q12799 353 aa23.47■■□□□ 1.35
FAM3A-211ENST00000433619 NAA16Q6N069 864 aaPredicted RBP23.47■■□□□ 1.35
FAM3A-211ENST00000433619 REM2Q8IYK8 340 aaPredicted RBP23.47■■□□□ 1.35
FAM3A-211ENST00000433619 SLC10A4Q96EP9 437 aa23.47■■□□□ 1.35
FAM3A-211ENST00000433619 SMARCA5O60264 1052 aaPredicted RBP23.46■■□□□ 1.35
FAM3A-211ENST00000433619 NPM3O75607 178 aaKnown RBP23.46■■□□□ 1.35
FAM3A-211ENST00000433619 WDHD1O75717 1129 aaPredicted RBP23.46■■□□□ 1.35
FAM3A-211ENST00000433619 ANKRD13AQ8IZ07 590 aa23.46■■□□□ 1.35
FAM3A-211ENST00000433619 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
FAM3A-211ENST00000433619 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
FAM3A-211ENST00000433619 ATP5JP18859 108 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 RGS3P49796 1198 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 PPP4CP60510 307 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 TMED8Q6PL24 325 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-211ENST00000433619 ZFPM1Q8IX07 1006 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 CSRNP1Q96S65 589 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 BCL11AQ9H165 835 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 ANTXR1Q9H6X2 564 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 NDUFB9Q9Y6M9 179 aa23.45■■□□□ 1.34
FAM3A-211ENST00000433619 RFX7Q2KHR2 1363 aa23.44■■□□□ 1.34
FAM3A-211ENST00000433619 TTF1Q15361 905 aaPredicted RBP23.44■■□□□ 1.34
FAM3A-211ENST00000433619 CLMNQ96JQ2 1002 aa23.44■■□□□ 1.34
FAM3A-211ENST00000433619 BAG3O95817 575 aa23.43■■□□□ 1.34
FAM3A-211ENST00000433619 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
FAM3A-211ENST00000433619 MAP3K9P80192 1104 aa23.43■■□□□ 1.34
FAM3A-211ENST00000433619 SPRYD7Q5W111 196 aa23.43■■□□□ 1.34
FAM3A-211ENST00000433619 DCAF15Q66K64 600 aa23.43■■□□□ 1.34
FAM3A-211ENST00000433619 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.43■■□□□ 1.34
FAM3A-211ENST00000433619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.43■■□□□ 1.34
FAM3A-211ENST00000433619 CA12O43570 354 aa23.42■■□□□ 1.34
FAM3A-211ENST00000433619 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
FAM3A-211ENST00000433619 MAP3K12Q12852 859 aa23.42■■□□□ 1.34
FAM3A-211ENST00000433619 HDAC1Q13547 482 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-211ENST00000433619 ADGRA1Q86SQ6 560 aa23.42■■□□□ 1.34
FAM3A-211ENST00000433619 NOL10Q9BSC4 688 aaKnown RBP23.42■■□□□ 1.34
FAM3A-211ENST00000433619 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
FAM3A-211ENST00000433619 MYO5AQ9Y4I1 1855 aaKnown RBP23.42■■□□□ 1.34
FAM3A-211ENST00000433619 PLCG2P16885 1265 aa23.41■■□□□ 1.34
FAM3A-211ENST00000433619 CYP7A1P22680 504 aa23.41■■□□□ 1.34
FAM3A-211ENST00000433619 TM4SF4P48230 202 aa23.41■■□□□ 1.34
FAM3A-211ENST00000433619 MIGA2Q7L4E1 593 aa23.41■■□□□ 1.34
FAM3A-211ENST00000433619 SH3BP5LQ7L8J4 393 aa23.41■■□□□ 1.34
FAM3A-211ENST00000433619 ZBTB48P10074 688 aaPredicted RBP23.4■■□□□ 1.34
FAM3A-211ENST00000433619 MAP3K10Q02779 954 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 WNK4Q96J92 1243 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 HAUS7Q99871 368 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 ZNF341Q9BYN7 854 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 BOLA2Q9H3K6 86 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
FAM3A-211ENST00000433619 ZNF112Q9UJU3 913 aa23.4■■□□□ 1.34
FAM3A-211ENST00000433619 HSPA8P11142 646 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms