RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 NFIAQ12857 509 aa23.12■■□□□ 1.29
RPUSD3-207ENST00000433555 NBPF12Q5TAG4 269 aaPredicted RBP23.12■■□□□ 1.29
RPUSD3-207ENST00000433555 C2orf69Q8N8R5 385 aa23.12■■□□□ 1.29
RPUSD3-207ENST00000433555 LAMB1P07942 1786 aa23.12■■□□□ 1.29
RPUSD3-207ENST00000433555 BTDP43251 543 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 HDAC1Q13547 482 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 TNFAIP1Q13829 316 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 PRKG1Q13976 671 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 PAXIP1Q6ZW49 1069 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 ADGRA1Q86SQ6 560 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 CAPNS2Q96L46 248 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 LRP2BPQ9P2M1 347 aa23.11■■□□□ 1.29
RPUSD3-207ENST00000433555 WDR33Q9C0J8 1336 aaKnown RBP23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 SIPA1L1O43166 1804 aa23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 GRM1Q13255 1194 aa23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 EDC3Q96F86 508 aaKnown RBP23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 FAM163AQ96GL9 167 aaPredicted RBP23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 HHIPL1Q96JK4 782 aa23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 RPAP1Q9BWH6 1393 aaPredicted RBP23.1■■□□□ 1.29
RPUSD3-207ENST00000433555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.09■■□□□ 1.29
RPUSD3-207ENST00000433555 USP40Q9NVE5 1235 aa23.09■■□□□ 1.29
RPUSD3-207ENST00000433555 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
RPUSD3-207ENST00000433555 FAM198AQ9UFP1 575 aa23.09■■□□□ 1.29
RPUSD3-207ENST00000433555 DDX60LQ5H9U9 1706 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 GPR75-ASB3A0A0A6YYF3 556 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 UBE2Q2LH0YL09 131 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 AOC2O75106 756 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 RHBDL3P58872 404 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 FKBP1BP68106 108 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 AAMPQ13685 434 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 FKBP1CQ5VVH2 108 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 TSHZ3Q63HK5 1081 aa23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 OTUD7AQ8TE49 926 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 DNAJC2Q99543 621 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-207ENST00000433555 FAM155AB1AL88 458 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 NF2P35240 595 aa23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 TNNI2P48788 182 aa23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 TTLL12Q14166 644 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 FAM83AQ86UY5 434 aa23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 DDX4Q9NQI0 724 aaKnown RBP23.07■■□□□ 1.28
RPUSD3-207ENST00000433555 WDHD1O75717 1129 aaPredicted RBP23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 IDH1O75874 414 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 ATP5JP18859 108 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 GSTO1P78417 241 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 TCP10Q12799 353 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 NAA16Q6N069 864 aaPredicted RBP23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 RGMBQ6NW40 437 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 ZFPM1Q8IX07 1006 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 SLF2Q8IX21 1173 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 ZIC5Q96T25 663 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 BOLA2Q9H3K6 86 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 ANGEL1Q9UNK9 670 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 NAV1Q8NEY1 1877 aa23.06■■□□□ 1.28
RPUSD3-207ENST00000433555 GOLIM4O00461 696 aa23.05■■□□□ 1.28
RPUSD3-207ENST00000433555 IGHDP01880 384 aa23.05■■□□□ 1.28
RPUSD3-207ENST00000433555 RGS3P49796 1198 aa23.05■■□□□ 1.28
RPUSD3-207ENST00000433555 RASAL3Q86YV0 1011 aa23.05■■□□□ 1.28
RPUSD3-207ENST00000433555 ATRNL1Q5VV63 1379 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 SLC10A3P09131 477 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 ECE1P42892 770 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 MAP3K11Q16584 847 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 HAUS7Q99871 368 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 IDI2Q9BXS1 227 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 PCNTO95613 3336 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 SALL3Q9BXA9 1300 aa23.04■■□□□ 1.28
RPUSD3-207ENST00000433555 LDHCP07864 332 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 SUPT20HL1Q3ZLR7 823 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 LDLRAD1Q5T700 205 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 ARMC9Q7Z3E5 817 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 SH3RF3Q8TEJ3 882 aaPredicted RBP23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 FAM151AQ8WW52 585 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 MYH1P12882 1939 aa23.03■■□□□ 1.28
RPUSD3-207ENST00000433555 USP2O75604 605 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 ZNF157P51786 506 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 PICALMQ13492 652 aa23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 SH3BP5LQ7L8J4 393 aa23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 GCC1Q96CN9 775 aa23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 CLMNQ96JQ2 1002 aa23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 PAG1Q9NWQ8 432 aa23.02■■□□□ 1.28
RPUSD3-207ENST00000433555 CYP7A1P22680 504 aa23.01■■□□□ 1.27
RPUSD3-207ENST00000433555 DYNLL1P63167 89 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-207ENST00000433555 SMC5Q8IY18 1101 aa23.01■■□□□ 1.27
RPUSD3-207ENST00000433555 DOCK1Q14185 1865 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 COL2A1P02458 1487 aaPredicted RBP23■■□□□ 1.27
RPUSD3-207ENST00000433555 ENTPD3O75355 529 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 CHGBP05060 677 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 HSPA1AP0DMV8 641 aaKnown RBP23■■□□□ 1.27
RPUSD3-207ENST00000433555 HSPA1BP0DMV9 641 aaKnown RBP23■■□□□ 1.27
RPUSD3-207ENST00000433555 PDE6AP16499 860 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 SLFNL1Q499Z3 407 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 ANKRD45Q5TZF3 282 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 MIGA1Q8NAN2 632 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
RPUSD3-207ENST00000433555 PPP1R12BO60237 982 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-207ENST00000433555 SLURP2P0DP57 97 aa22.99■■□□□ 1.27
RPUSD3-207ENST00000433555 MAP3K12Q12852 859 aa22.99■■□□□ 1.27
RPUSD3-207ENST00000433555 TTF1Q15361 905 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms