RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PPFIA3O75145 1194 aa23■■□□□ 1.27
VRK2-205ENST00000432057 FOSBP53539 338 aa23■■□□□ 1.27
VRK2-205ENST00000432057 NAA16Q6N069 864 aaPredicted RBP23■■□□□ 1.27
VRK2-205ENST00000432057 NRXN2Q9P2S2 1712 aa23■■□□□ 1.27
VRK2-205ENST00000432057 HPS5Q9UPZ3 1129 aa23■■□□□ 1.27
VRK2-205ENST00000432057 MYH2Q9UKX2 1941 aa23■■□□□ 1.27
VRK2-205ENST00000432057 SH2B2O14492 632 aaPredicted RBP23■■□□□ 1.27
VRK2-205ENST00000432057 ZNF827Q17R98 1081 aa23■■□□□ 1.27
VRK2-205ENST00000432057 CRY2Q49AN0 593 aa23■■□□□ 1.27
VRK2-205ENST00000432057 RIOK1Q9BRS2 568 aaKnown RBP23■■□□□ 1.27
VRK2-205ENST00000432057 H3BQV1 296 aa22.99■■□□□ 1.27
VRK2-205ENST00000432057 POLRMTO00411 1230 aaKnown RBP22.99■■□□□ 1.27
VRK2-205ENST00000432057 DYNLL1P63167 89 aaKnown RBP22.99■■□□□ 1.27
VRK2-205ENST00000432057 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
VRK2-205ENST00000432057 SDR42E1Q8WUS8 393 aa22.99■■□□□ 1.27
VRK2-205ENST00000432057 PANK2Q9BZ23 570 aa22.99■■□□□ 1.27
VRK2-205ENST00000432057 ANGEL1Q9UNK9 670 aaKnown RBP22.99■■□□□ 1.27
VRK2-205ENST00000432057 XDHP47989 1333 aa22.99■■□□□ 1.27
VRK2-205ENST00000432057 RESTQ13127 1097 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 TPRNQ4KMQ1 711 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 JAG2Q9Y219 1238 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 LTBP1Q14766 1721 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 KRT85P78386 507 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 AKNAD1Q5T1N1 836 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 POTEAQ6S8J7 498 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 NSUN4Q96CB9 384 aaKnown RBP22.98■■□□□ 1.27
VRK2-205ENST00000432057 LEMD3Q9Y2U8 911 aa22.98■■□□□ 1.27
VRK2-205ENST00000432057 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 UBE2HP62256 183 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 MECOMQ03112 1051 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 CSPP1Q1MSJ5 1256 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 CHMP4CQ96CF2 233 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 GPR101Q96P66 508 aaPredicted RBP22.97■■□□□ 1.27
VRK2-205ENST00000432057 KIF3AQ9Y496 699 aa22.97■■□□□ 1.27
VRK2-205ENST00000432057 STAG1Q8WVM7 1258 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 SENP2Q9HC62 589 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
VRK2-205ENST00000432057 SYCE3A1L190 88 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 KDM4AO75164 1064 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 APBA3O96018 575 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 PRDX5P30044 214 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 GPSM2P81274 684 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 MFSD6Q6ZSS7 791 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 STK11IPQ8N1F8 1099 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 RBM17Q96I25 401 aaKnown RBP22.96■■□□□ 1.27
VRK2-205ENST00000432057 TMEM87BQ96K49 555 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 CNNM2Q9H8M5 875 aa22.96■■□□□ 1.27
VRK2-205ENST00000432057 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.26
VRK2-205ENST00000432057 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.26
VRK2-205ENST00000432057 PLSCR1O15162 318 aa22.95■■□□□ 1.26
VRK2-205ENST00000432057 FDPSP14324 419 aaKnown RBP22.95■■□□□ 1.26
VRK2-205ENST00000432057 TTC6Q86TZ1 520 aa22.95■■□□□ 1.26
VRK2-205ENST00000432057 DLEC1Q9Y238 1755 aa22.95■■□□□ 1.26
VRK2-205ENST00000432057 PPARAQ07869 468 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 RRP12Q5JTH9 1297 aaKnown RBP22.94■■□□□ 1.26
VRK2-205ENST00000432057 IGDCC4Q8TDY8 1250 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 SYAP1Q96A49 352 aaPredicted RBP22.94■■□□□ 1.26
VRK2-205ENST00000432057 AKT1S1Q96B36 256 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 KRT23Q9C075 422 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 LY9Q9HBG7 655 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 CDK5RAP2Q96SN8 1893 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 HMGB2P26583 209 aaKnown RBP22.94■■□□□ 1.26
VRK2-205ENST00000432057 TMEM67Q5HYA8 995 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 TOMM22Q9NS69 142 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 ZSWIM5Q9P217 1185 aa22.94■■□□□ 1.26
VRK2-205ENST00000432057 MINDY4BA8MYZ0 360 aa22.93■■□□□ 1.26
VRK2-205ENST00000432057 DHX16O60231 1041 aaKnown RBP22.93■■□□□ 1.26
VRK2-205ENST00000432057 APOA5Q6Q788 366 aa22.93■■□□□ 1.26
VRK2-205ENST00000432057 ZBTB22O15209 634 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 COL23A1Q86Y22 540 aaPredicted RBP22.92■■□□□ 1.26
VRK2-205ENST00000432057 ZSCAN16Q9H4T2 348 aaPredicted RBP22.92■■□□□ 1.26
VRK2-205ENST00000432057 TFIP11Q9UBB9 837 aaKnown RBP22.92■■□□□ 1.26
VRK2-205ENST00000432057 NAV1Q8NEY1 1877 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 SMIM22K7EJ46 135 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 CPLX1O14810 134 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 IFIT3O14879 490 aaKnown RBP22.92■■□□□ 1.26
VRK2-205ENST00000432057 UFL1O94874 794 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 RXRAP19793 462 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 METAP2P50579 478 aaKnown RBP eCLIP22.92■■□□□ 1.26
VRK2-205ENST00000432057 GUCY1B3Q02153 619 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 LRSAM1Q6UWE0 723 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 NFXL1Q6ZNB6 911 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 ZNF804AQ7Z570 1209 aa22.92■■□□□ 1.26
VRK2-205ENST00000432057 MYH6P13533 1939 aa22.91■■□□□ 1.26
VRK2-205ENST00000432057 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
VRK2-205ENST00000432057 MICU3Q86XE3 530 aa22.91■■□□□ 1.26
VRK2-205ENST00000432057 TDRD7Q8NHU6 1098 aaKnown RBP22.91■■□□□ 1.26
VRK2-205ENST00000432057 BRIP1Q9BX63 1249 aa22.91■■□□□ 1.26
VRK2-205ENST00000432057 AATFQ9NY61 560 aaKnown RBP eCLIP22.91■■□□□ 1.26
VRK2-205ENST00000432057 ANAPC4Q9UJX5 808 aa22.91■■□□□ 1.26
VRK2-205ENST00000432057 ELP1O95163 1332 aa22.91■■□□□ 1.26
VRK2-205ENST00000432057 C15orf52Q6ZUT6 534 aaKnown RBP22.9■■□□□ 1.26
VRK2-205ENST00000432057 SGMS1Q86VZ5 419 aa22.9■■□□□ 1.26
VRK2-205ENST00000432057 RNF41Q9H4P4 317 aaPredicted RBP22.9■■□□□ 1.26
VRK2-205ENST00000432057 ORC3Q9UBD5 711 aaPredicted RBP22.9■■□□□ 1.26
VRK2-205ENST00000432057 CYP2D7A0A087X1C5 515 aa22.9■■□□□ 1.26
VRK2-205ENST00000432057 LIFRP42702 1097 aa22.9■■□□□ 1.26
VRK2-205ENST00000432057 DZIP1Q86YF9 867 aaKnown RBP22.9■■□□□ 1.26
VRK2-205ENST00000432057 SPATA32Q96LK8 384 aa22.9■■□□□ 1.26
VRK2-205ENST00000432057 ZKSCAN3Q9BRR0 538 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms