RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 MAST3O60307 1309 aa17.75■□□□□ 0.43
SMARCE1-205ENST00000431889 IRF6O14896 467 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 USP40Q9NVE5 1235 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 PDE4DIPQ5VU43 2346 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 UNCXA6NJT0 531 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 BCAR3O75815 825 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 LDHBP07195 334 aaKnown RBP17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 GTF2A2P52657 109 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 ERO1AQ96HE7 468 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 ARHGAP39Q9C0H5 1083 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 EFCC1Q9HA90 598 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 PTPN22Q9Y2R2 807 aa17.74■□□□□ 0.43
SMARCE1-205ENST00000431889 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 CIAO1O76071 339 aa17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 TFCP2Q12800 502 aa17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
SMARCE1-205ENST00000431889 BTBD19C9JJ37 291 aa17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 IL15P40933 162 aaPredicted RBP17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 CCDC102BQ68D86 513 aa17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 ABCF2Q9UG63 623 aa17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 SUGT1Q9Y2Z0 365 aa17.72■□□□□ 0.43
SMARCE1-205ENST00000431889 ERO1BQ86YB8 467 aa17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 FAM151AQ8WW52 585 aa17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 MRIQ9BWK5 157 aa17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 ZFYVE28Q9HCC9 887 aa17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
SMARCE1-205ENST00000431889 RASGRF1Q13972 1273 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 NEUROD6Q96NK8 337 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 EN2P19622 333 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 DCAF15Q66K64 600 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 DENND2AQ9ULE3 1009 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 PTCH2Q9Y6C5 1203 aa17.7■□□□□ 0.42
SMARCE1-205ENST00000431889 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 SLC34A2O95436 690 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 TRIM27P14373 513 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 PICALMQ13492 652 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
SMARCE1-205ENST00000431889 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 CETPP11597 493 aa17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 RGS3P49796 1198 aa17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
SMARCE1-205ENST00000431889 DOCK2Q92608 1830 aa17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 PPIL2Q13356 520 aa17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 CCDC84Q86UT8 332 aaPredicted RBP17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 SH3TC2Q8TF17 1288 aa17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
SMARCE1-205ENST00000431889 CTGFP29279 349 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 FAM196BA6NMK8 535 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 GNAI3P08754 354 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 BTDP43251 543 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 HOOK2Q96ED9 719 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 RPAP1Q9BWH6 1393 aaPredicted RBP17.66■□□□□ 0.42
SMARCE1-205ENST00000431889 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 DDTLA6NHG4 134 aaPredicted RBP17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 PDHXO00330 501 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 TLR2O60603 784 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 MECOMQ03112 1051 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 PPATQ06203 517 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 SLC9C1Q4G0N8 1177 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 PRPF38BQ5VTL8 546 aaKnown RBP17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 TMEM57Q8N5G2 664 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
SMARCE1-205ENST00000431889 SEMA3EO15041 775 aa17.64■□□□□ 0.41
SMARCE1-205ENST00000431889 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-205ENST00000431889 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
SMARCE1-205ENST00000431889 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
SMARCE1-205ENST00000431889 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.41
SMARCE1-205ENST00000431889 KIAA0100Q14667 2235 aaKnown RBP17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 WDHD1O75717 1129 aaPredicted RBP17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 CYP2C8P10632 490 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 MOGSQ13724 837 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 ARMC5Q96C12 935 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
SMARCE1-205ENST00000431889 PHF20L1A8MW92 1017 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms