RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 MEIS3Q99687 375 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
SEC13-211ENST00000431352 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
SEC13-211ENST00000431352 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
SEC13-211ENST00000431352 CETPP11597 493 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 INPP5BP32019 993 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 PHKA1P46020 1223 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 NFIAQ12857 509 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
SEC13-211ENST00000431352 ZNF341Q9BYN7 854 aa17.31■□□□□ 0.36
SEC13-211ENST00000431352 IRF6O14896 467 aa17.3■□□□□ 0.36
SEC13-211ENST00000431352 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
SEC13-211ENST00000431352 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
SEC13-211ENST00000431352 BTBD19C9JJ37 291 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
SEC13-211ENST00000431352 MYCP01106 439 aaPredicted RBP17.29■□□□□ 0.36
SEC13-211ENST00000431352 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
SEC13-211ENST00000431352 PPIL2Q13356 520 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
SEC13-211ENST00000431352 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
SEC13-211ENST00000431352 FAM151AQ8WW52 585 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 DENND2AQ9ULE3 1009 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
SEC13-211ENST00000431352 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
SEC13-211ENST00000431352 ARHGAP39Q9C0H5 1083 aa17.28■□□□□ 0.36
SEC13-211ENST00000431352 ZSWIM8A7E2V4 1837 aa17.28■□□□□ 0.36
SEC13-211ENST00000431352 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
SEC13-211ENST00000431352 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
SEC13-211ENST00000431352 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
SEC13-211ENST00000431352 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.36
SEC13-211ENST00000431352 HDAC5Q9UQL6 1122 aa17.27■□□□□ 0.36
SEC13-211ENST00000431352 AK9Q5TCS8 1911 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 SEMA3EO15041 775 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 TLR2O60603 784 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 PPATQ06203 517 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 ARHGEF6Q15052 776 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
SEC13-211ENST00000431352 ZFPM1Q8IX07 1006 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
SEC13-211ENST00000431352 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
SEC13-211ENST00000431352 EN2P19622 333 aaPredicted RBP17.25■□□□□ 0.35
SEC13-211ENST00000431352 RGS3P49796 1198 aa17.25■□□□□ 0.35
SEC13-211ENST00000431352 TIMM10P62072 90 aa17.25■□□□□ 0.35
SEC13-211ENST00000431352 KIF22Q14807 665 aa17.25■□□□□ 0.35
SEC13-211ENST00000431352 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
SEC13-211ENST00000431352 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
SEC13-211ENST00000431352 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
SEC13-211ENST00000431352 TFCP2Q12800 502 aa17.24■□□□□ 0.35
SEC13-211ENST00000431352 ZSCAN29Q8IWY8 852 aaPredicted RBP17.24■□□□□ 0.35
SEC13-211ENST00000431352 ZGPATQ8N5A5 531 aaKnown RBP17.24■□□□□ 0.35
SEC13-211ENST00000431352 ZNF333Q96JL9 665 aa17.24■□□□□ 0.35
SEC13-211ENST00000431352 ZCCHC17Q9NP64 241 aaKnown RBP17.24■□□□□ 0.35
SEC13-211ENST00000431352 TNNQ9UQP3 1299 aa17.24■□□□□ 0.35
SEC13-211ENST00000431352 RBBP6Q7Z6E9 1792 aaKnown RBP17.23■□□□□ 0.35
SEC13-211ENST00000431352 A0A1B0GUL7 405 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 PDHXO00330 501 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 GNAI3P08754 354 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 PICALMQ13492 652 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 SLC4A8Q2Y0W8 1093 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
SEC13-211ENST00000431352 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 DOCK2Q92608 1830 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 CENPFP49454 3210 aa17.23■□□□□ 0.35
SEC13-211ENST00000431352 MYH2Q9UKX2 1941 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 BTDP43251 543 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 NBPF11Q86T75 865 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 XAGE2Q96GT9 111 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 NEUROD6Q96NK8 337 aa17.22■□□□□ 0.35
SEC13-211ENST00000431352 GAKO14976 1311 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 RFX7Q2KHR2 1363 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 TRIM27P14373 513 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
SEC13-211ENST00000431352 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
SEC13-211ENST00000431352 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 PICK1Q9NRD5 415 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
SEC13-211ENST00000431352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
SEC13-211ENST00000431352 ENTPD3O75355 529 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
SEC13-211ENST00000431352 C17orf99Q6UX52 265 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 SH3BP5LQ7L8J4 393 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
SEC13-211ENST00000431352 DDX4Q9NQI0 724 aaKnown RBP17.2■□□□□ 0.34
SEC13-211ENST00000431352 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms