RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 FKTNO75072 461 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 VGLL4Q14135 290 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 FAM83AQ86UY5 434 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 DAGLAQ9Y4D2 1042 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 CSADQ9Y600 493 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
HMGN1P38-201ENST00000431116 GNAI2P04899 355 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 MLLT1Q03111 559 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 TFCP2Q12800 502 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
HMGN1P38-201ENST00000431116 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 SOX10P56693 466 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 PKN2Q16513 984 aaKnown RBP12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 CDC42EP5Q6NZY7 148 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
HMGN1P38-201ENST00000431116 CCL15-CCL14A0A0B4J2E2 113 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 RGS19P49795 217 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 TIMM10P62072 90 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 TCP10Q12799 353 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 NFIAQ12857 509 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 CRHR2Q13324 411 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 CCL15Q16663 113 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 XAGE2Q96GT9 111 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 PTPN18Q99952 460 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 SNCAIPQ9Y6H5 919 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
HMGN1P38-201ENST00000431116 PNMA6EA0A0J9YXQ4 647 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 GTF2A2P52657 109 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 FAM151AQ8WW52 585 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 BRI3BPQ8WY22 251 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 NEUROD6Q96NK8 337 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
HMGN1P38-201ENST00000431116 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 FBXO46Q6PJ61 603 aaPredicted RBP12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 ERO1BQ86YB8 467 aa12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 GAKO14976 1311 aa12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 ZBED9Q6R2W3 1325 aa12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 RFX7Q2KHR2 1363 aa12.54□□□□□ -0.4
HMGN1P38-201ENST00000431116 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 TRIM17Q9Y577 477 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 DOCK1Q14185 1865 aa12.53□□□□□ -0.4
HMGN1P38-201ENST00000431116 IRF6O14896 467 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 CETPP11597 493 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 INPP5BP32019 993 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 BTDP43251 543 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 RGS3P49796 1198 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 PPIL2Q13356 520 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 OTOP1Q7RTM1 612 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 CD99L2Q8TCZ2 262 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.41
HMGN1P38-201ENST00000431116 MYO5AQ9Y4I1 1855 aaKnown RBP12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 RLBP1P12271 317 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 SP3Q02447 781 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 MECOMQ03112 1051 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 PPATQ06203 517 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms