RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 CAVIN4Q5BKX8 364 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 ADGRA1Q86SQ6 560 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 ZSCAN30Q86W11 494 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 NLRP3Q96P20 1036 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 NACAP1Q9BZK3 213 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 TNMDQ9H2S6 317 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 CCDC192P0DO97 292 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 TMEM67Q5HYA8 995 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 AKNAD1Q5T1N1 836 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 MEX3CQ5U5Q3 659 aaKnown RBP18.97■□□□□ 0.63
MBD4-203ENST00000429544 APOA5Q6Q788 366 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 NFXL1Q6ZNB6 911 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 CLSTN2Q9H4D0 955 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 RCOR1Q9UKL0 485 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 KDM4AO75164 1064 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 HS1BP3Q53T59 392 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 IGDCC4Q8TDY8 1250 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
MBD4-203ENST00000429544 LY9Q9HBG7 655 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 USP25Q9UHP3 1055 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 RPS8P62241 208 aaKnown RBP18.96■□□□□ 0.63
MBD4-203ENST00000429544 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 CKAP2LQ8IYA6 745 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 FAM84BQ96KN1 310 aaPredicted RBP18.96■□□□□ 0.63
MBD4-203ENST00000429544 GJB4Q9NTQ9 266 aa18.96■□□□□ 0.63
MBD4-203ENST00000429544 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
MBD4-203ENST00000429544 ATL3Q6DD88 541 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 MFSD6Q6ZSS7 791 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 CCDC144CPQ8IYA2 1237 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 STK11IPQ8N1F8 1099 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 CNNM2Q9H8M5 875 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 ZSWIM5Q9P217 1185 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
MBD4-203ENST00000429544 IFIT3O14879 490 aaKnown RBP18.95■□□□□ 0.62
MBD4-203ENST00000429544 KLRK1P26718 216 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 FBXO18Q8NFZ0 1043 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 MYL10Q9BUA6 226 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 TOMM22Q9NS69 142 aa18.95■□□□□ 0.62
MBD4-203ENST00000429544 MAGEB6P1A0A0J9YX57 407 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 ZBTB43O43298 467 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 CDC27P30260 824 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 STAG1Q8WVM7 1258 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
MBD4-203ENST00000429544 KRT23Q9C075 422 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 TYRO3Q06418 890 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
MBD4-203ENST00000429544 GOLGA8AA7E2F4 631 aa18.93■□□□□ 0.62
MBD4-203ENST00000429544 SGMS1Q86VZ5 419 aa18.93■□□□□ 0.62
MBD4-203ENST00000429544 CCDC39Q9UFE4 941 aa18.93■□□□□ 0.62
MBD4-203ENST00000429544 CDKL5O76039 1030 aa18.93■□□□□ 0.62
MBD4-203ENST00000429544 MSNP26038 577 aaKnown RBP18.93■□□□□ 0.62
MBD4-203ENST00000429544 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
MBD4-203ENST00000429544 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
MBD4-203ENST00000429544 BAZ2AQ9UIF9 1905 aaKnown RBP18.93■□□□□ 0.62
MBD4-203ENST00000429544 NPHP1O15259 732 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 POLR3DP05423 398 aaPredicted RBP18.92■□□□□ 0.62
MBD4-203ENST00000429544 FBXO33Q7Z6M2 555 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 GOLPH3LQ9H4A5 285 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 TAOK2Q9UL54 1235 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 MRVI1Q9Y6F6 885 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 AFF2P51816 1311 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 LIFRP42702 1097 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 CPLX2Q6PUV4 134 aaKnown RBP18.92■□□□□ 0.62
MBD4-203ENST00000429544 RBM43Q6ZSC3 357 aaKnown RBP18.92■□□□□ 0.62
MBD4-203ENST00000429544 PHKBQ93100 1093 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 ZKSCAN3Q9BRR0 538 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 ALG1Q9BT22 464 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 TFCP2L1Q9NZI6 479 aa18.92■□□□□ 0.62
MBD4-203ENST00000429544 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 PTMAP06454 111 aaKnown RBP18.91■□□□□ 0.62
MBD4-203ENST00000429544 RFC4P35249 363 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 ME1P48163 572 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 DYNLL1P63167 89 aaKnown RBP18.91■□□□□ 0.62
MBD4-203ENST00000429544 PPARAQ07869 468 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 SLC12A7Q9Y666 1083 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 KIF23Q02241 960 aaPredicted RBP18.91■□□□□ 0.62
MBD4-203ENST00000429544 RIOK1Q9BRS2 568 aaKnown RBP18.91■□□□□ 0.62
MBD4-203ENST00000429544 ANKRD2Q9GZV1 360 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 RTEL1Q9NZ71 1219 aa18.91■□□□□ 0.62
MBD4-203ENST00000429544 ADCY5O95622 1261 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 FAM217BQ9NTX9 383 aaPredicted RBP18.9■□□□□ 0.62
MBD4-203ENST00000429544 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
MBD4-203ENST00000429544 CLIC4Q9Y696 253 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 CCDC73Q6ZRK6 1079 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 ZNF384Q8TF68 577 aa18.9■□□□□ 0.62
MBD4-203ENST00000429544 RNF41Q9H4P4 317 aaPredicted RBP18.9■□□□□ 0.62
MBD4-203ENST00000429544 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.9■□□□□ 0.62
MBD4-203ENST00000429544 SEMA3EO15041 775 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
MBD4-203ENST00000429544 TM4SF1P30408 202 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 PLCB2Q00722 1185 aa18.89■□□□□ 0.61
MBD4-203ENST00000429544 WTAPQ15007 396 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms