RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
CASC4-203ENST00000429162 MFSD6Q6ZSS7 791 aa23.18■■□□□ 1.3
CASC4-203ENST00000429162 LEO1Q8WVC0 666 aaPredicted RBP23.18■■□□□ 1.3
CASC4-203ENST00000429162 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
CASC4-203ENST00000429162 CFAP45Q9UL16 551 aa23.18■■□□□ 1.3
CASC4-203ENST00000429162 HMGB2P26583 209 aaKnown RBP23.18■■□□□ 1.3
CASC4-203ENST00000429162 KLRK1P26718 216 aa23.18■■□□□ 1.3
CASC4-203ENST00000429162 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
CASC4-203ENST00000429162 FDPSP14324 419 aaKnown RBP23.17■■□□□ 1.3
CASC4-203ENST00000429162 FOSBP53539 338 aa23.17■■□□□ 1.3
CASC4-203ENST00000429162 ATL3Q6DD88 541 aa23.17■■□□□ 1.3
CASC4-203ENST00000429162 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
CASC4-203ENST00000429162 GOLGA6L4A6NEF3 574 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 CDKL5O76039 1030 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 METAP2P50579 478 aaKnown RBP eCLIP23.16■■□□□ 1.3
CASC4-203ENST00000429162 TPRNQ4KMQ1 711 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 PRR5LQ6MZQ0 368 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 SGMS1Q86VZ5 419 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 RIOK1Q9BRS2 568 aaKnown RBP23.16■■□□□ 1.3
CASC4-203ENST00000429162 TFIP11Q9UBB9 837 aaKnown RBP23.16■■□□□ 1.3
CASC4-203ENST00000429162 LIFRP42702 1097 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 CPLX2Q6PUV4 134 aaKnown RBP23.16■■□□□ 1.3
CASC4-203ENST00000429162 APOA5Q6Q788 366 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 RGS22Q8NE09 1264 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 IGDCC4Q8TDY8 1250 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 MTA3Q9BTC8 594 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 LY9Q9HBG7 655 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 TFCP2L1Q9NZI6 479 aa23.16■■□□□ 1.3
CASC4-203ENST00000429162 ORC3Q9UBD5 711 aaPredicted RBP23.16■■□□□ 1.3
CASC4-203ENST00000429162 KDM4AO75164 1064 aa23.15■■□□□ 1.3
CASC4-203ENST00000429162 GYS1P13807 737 aa23.15■■□□□ 1.3
CASC4-203ENST00000429162 ST5P78524 1137 aa23.15■■□□□ 1.3
CASC4-203ENST00000429162 NFXL1Q6ZNB6 911 aa23.15■■□□□ 1.3
CASC4-203ENST00000429162 NKX2-3Q8TAU0 364 aa23.15■■□□□ 1.3
CASC4-203ENST00000429162 PPARAQ07869 468 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 FBXO41Q8TF61 875 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 C8orf76Q96K31 380 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 ZNF396Q96N95 335 aaPredicted RBP23.14■■□□□ 1.3
CASC4-203ENST00000429162 PPP1R9BQ96SB3 815 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 LEMD3Q9Y2U8 911 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 IRS2Q9Y4H2 1338 aa23.14■■□□□ 1.3
CASC4-203ENST00000429162 ZBTB43O43298 467 aa23.14■■□□□ 1.29
CASC4-203ENST00000429162 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.29
CASC4-203ENST00000429162 RAB11FIP4Q86YS3 637 aa23.14■■□□□ 1.29
CASC4-203ENST00000429162 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
CASC4-203ENST00000429162 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
CASC4-203ENST00000429162 NSUN4Q96CB9 384 aaKnown RBP23.13■■□□□ 1.29
CASC4-203ENST00000429162 BRIP1Q9BX63 1249 aa23.13■■□□□ 1.29
CASC4-203ENST00000429162 ZSWIM5Q9P217 1185 aa23.13■■□□□ 1.29
CASC4-203ENST00000429162 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
CASC4-203ENST00000429162 NID2Q14112 1375 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 XDHP47989 1333 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 IGSF3O75054 1194 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 TRIM37O94972 964 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 FAM43AQ8N2R8 423 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 SDR42E1Q8WUS8 393 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 ANKIB1Q9P2G1 1089 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 CCDC69A6NI79 296 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 PPFIA3O75145 1194 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 CHAF1AQ13111 956 aaPredicted RBP23.12■■□□□ 1.29
CASC4-203ENST00000429162 RRP12Q5JTH9 1297 aaKnown RBP23.12■■□□□ 1.29
CASC4-203ENST00000429162 GIMAP6Q6P9H5 292 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 INCENPQ9NQS7 918 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 TACC3Q9Y6A5 838 aa23.12■■□□□ 1.29
CASC4-203ENST00000429162 CCDC88AQ3V6T2 1871 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 GOLGA8AA7E2F4 631 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 SERPINB2P05120 415 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 ADD1P35611 737 aaKnown RBP23.11■■□□□ 1.29
CASC4-203ENST00000429162 MECOMQ03112 1051 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 SPTY2D1Q68D10 685 aaPredicted RBP23.11■■□□□ 1.29
CASC4-203ENST00000429162 MICU3Q86XE3 530 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 ZNF384Q8TF68 577 aa23.11■■□□□ 1.29
CASC4-203ENST00000429162 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 ERICH2A1L162 156 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 DYNLL1P63167 89 aaKnown RBP23.1■■□□□ 1.29
CASC4-203ENST00000429162 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 SYNE3Q6ZMZ3 975 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 FBXO18Q8NFZ0 1043 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 TRIM44Q96DX7 344 aaPredicted RBP23.1■■□□□ 1.29
CASC4-203ENST00000429162 SLC12A7Q9Y666 1083 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 SENP2Q9HC62 589 aa23.1■■□□□ 1.29
CASC4-203ENST00000429162 DDX19AQ9NUU7 478 aaKnown RBP23.1■■□□□ 1.29
CASC4-203ENST00000429162 MINDY4BA8MYZ0 360 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 WTAPQ15007 396 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 BICD2Q8TD16 824 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 NUP62CLQ9H1M0 184 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 RCOR1Q9UKL0 485 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 ECM29Q5VYK3 1845 aa23.09■■□□□ 1.29
CASC4-203ENST00000429162 LAMB1P07942 1786 aa23.08■■□□□ 1.29
CASC4-203ENST00000429162 PCP11498 1178 aaKnown RBP23.08■■□□□ 1.29
CASC4-203ENST00000429162 LIG1P18858 919 aa23.08■■□□□ 1.29
CASC4-203ENST00000429162 C15orf52Q6ZUT6 534 aaKnown RBP23.08■■□□□ 1.29
CASC4-203ENST00000429162 BRAPQ7Z569 592 aa23.08■■□□□ 1.29
CASC4-203ENST00000429162 TXNRD3Q86VQ6 643 aa23.08■■□□□ 1.29
CASC4-203ENST00000429162 TMTC2Q8N394 836 aa23.08■■□□□ 1.29
CASC4-203ENST00000429162 ESR2Q92731 530 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms