RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MAPK8IP1Q9UQF2 711 aa14.37□□□□□ -0.11
CDH3-202ENST00000429102 PRKAB2O43741 272 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 KIF20AO95235 890 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 A0A0U1RQJ8 604 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 ZBTB43O43298 467 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 CDC25BP30305 580 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 RABL6Q3YEC7 729 aaPredicted RBP14.36□□□□□ -0.11
CDH3-202ENST00000429102 FOXP4Q8IVH2 680 aaPredicted RBP14.36□□□□□ -0.11
CDH3-202ENST00000429102 ATRIPQ8WXE1 791 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 KCNH3Q9ULD8 1083 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 CCDC102BQ68D86 513 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
CDH3-202ENST00000429102 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 SAMSN1Q9NSI8 373 aaKnown RBP14.36□□□□□ -0.11
CDH3-202ENST00000429102 WWC3Q9ULE0 1092 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 NFE2L3Q9Y4A8 694 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 AGLP35573 1532 aa14.36□□□□□ -0.11
CDH3-202ENST00000429102 H7C1W4 665 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 PHACTR2O75167 634 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 EVA1CP58658 441 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 MYL5Q02045 173 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 NCAPHQ15003 741 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 CCDC150Q8NCX0 1101 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 DHX58Q96C10 678 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 WDR24Q96S15 920 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 GREM2Q9H772 168 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 PRDM1O75626 825 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 MCAMP43121 646 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 PHKA1P46020 1223 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 ETF1P62495 437 aaKnown RBP14.35□□□□□ -0.11
CDH3-202ENST00000429102 MCM6Q14566 821 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
CDH3-202ENST00000429102 CCDC12Q8WUD4 166 aaPredicted RBP14.35□□□□□ -0.11
CDH3-202ENST00000429102 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 SERTAD1Q9UHV2 236 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 SLC12A7Q9Y666 1083 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 TNNT3P45378 269 aaPredicted RBP14.35□□□□□ -0.11
CDH3-202ENST00000429102 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
CDH3-202ENST00000429102 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 NAPBQ9H115 298 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 FOXP2O15409 715 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 CASQ1P31415 396 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 TDO2P48775 406 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 CASP7P55210 303 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 CABP5Q9NP86 173 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 PIH1D3Q9NQM4 214 aaKnown RBP14.34□□□□□ -0.11
CDH3-202ENST00000429102 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
CDH3-202ENST00000429102 MORC2Q9Y6X9 1032 aaPredicted RBP14.34□□□□□ -0.11
CDH3-202ENST00000429102 ITGA6P23229 1130 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
CDH3-202ENST00000429102 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 APPBP2Q92624 585 aa14.34□□□□□ -0.11
CDH3-202ENST00000429102 TRMT112Q9UI30 125 aaKnown RBP14.34□□□□□ -0.11
CDH3-202ENST00000429102 FAM205CA6NFA0 338 aa14.33□□□□□ -0.11
CDH3-202ENST00000429102 CMA1P23946 247 aa14.33□□□□□ -0.11
CDH3-202ENST00000429102 LRP10Q7Z4F1 713 aa14.33□□□□□ -0.11
CDH3-202ENST00000429102 ASAP1Q9ULH1 1129 aa14.33□□□□□ -0.11
CDH3-202ENST00000429102 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 HLFQ16534 295 aa14.33□□□□□ -0.12
CDH3-202ENST00000429102 MB21D2Q8IYB1 491 aaPredicted RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 YEATS4O95619 227 aa14.33□□□□□ -0.12
CDH3-202ENST00000429102 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDH3-202ENST00000429102 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
CDH3-202ENST00000429102 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
CDH3-202ENST00000429102 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
CDH3-202ENST00000429102 KDM6AO15550 1401 aaPredicted RBP14.33□□□□□ -0.12
CDH3-202ENST00000429102 MBD4O95243 580 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
CDH3-202ENST00000429102 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDH3-202ENST00000429102 APOA5Q6Q788 366 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
CDH3-202ENST00000429102 ARGLU1Q9NWB6 273 aaPredicted RBP14.32□□□□□ -0.12
CDH3-202ENST00000429102 FANCGO15287 622 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 RHOXF2BP0C7M4 288 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 GDAP1L1Q96MZ0 367 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 RHOXF2Q9BQY4 288 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDH3-202ENST00000429102 PPP2R2CQ9Y2T4 447 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 NEDD4P46934 1319 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 ST5P78524 1137 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 SSRP1Q08945 709 aaKnown RBP14.32□□□□□ -0.12
CDH3-202ENST00000429102 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 OSBPL5Q9H0X9 879 aaPredicted RBP14.32□□□□□ -0.12
CDH3-202ENST00000429102 ZSWIM5Q9P217 1185 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
CDH3-202ENST00000429102 SOWAHDA6NJG2 315 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 TEX33O43247 280 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms